1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' |
gtaatattccattgctcctttcacttaatatttgactctcttgctcgtgtgtagGTGTTCGCAGACAGTGAAACAGGCAATTTTCCTTTAAATGTATCACGTAGCCTTTTGTGGAATTTGCATCGAAAGTTTGTATACTTCGGAACATCAGTTC
species | Selaginella moellendorffii |
transcript | EFJ08215 |
intron # | 12 |
splice site | 3' |
intron type | U2 |
EST: CAATGCGTGGAAGTTTTCCTTTAAATGGCACCTATTTCCAAGTGAACGAG GTGTTCGCAGACAGTGAAACAGGCAATTTTCCTTTAAATGTATCACGTAGCEST: gi|169077269|gb|FE485155.1|FE485155
genomic: CAATGCGTGGAAGTTTTCCTTTAAATGGCACCTATTTCCAAGTGAACGAGgtaatattcc ... tcgtgtgtagGTGTTCGCAGACAGTGAAACAGGCAATTTTCCTTTAAATGTATCACGTAGC
EST: CAATGCGTGGAAGTTTTCCTTTAAATGGCACCTATTTCCAAGTGAACGAG GTGTTTGCAGACAGTGAAACAGGCAATTTTCCTTTAAATGTATCACGTAGCEST: gi|169110368|gb|FE512127.1|FE512127
genomic: CAATGCGTGGAAGTTTTCCTTTAAATGGCACCTATTTCCAAGTGAACGAGgtaatattcc ... tcgtgtgtagGTGTTCGCAGACAGTGAAACAGGCAATTTTCCTTTAAATGTATCACGTAGC
EST: CAATGCGTGGAAGTTTTCCTTTAAATGGCACCTATTTCCAAGTGAACGAG GTGTTCGCAGACAGTGAAACAGGCAATTTTCCTTTAAATGTATCACGTAGCEST: gi|169044209|gb|FE452939.1|FE452939
genomic: CAATGCGTGGAAGTTTTCCTTTAAATGGCACCTATTTCCAAGTGAACGAGgtaatattcc ... tcgtgtgtagGTGTTCGCAGACAGTGAAACAGGCAATTTTCCTTTAAATGTATCACGTAGC
EST: CAATGCGTGGAAGTTTTCCTTTAAATGGCACCTATTTCCAAGTGAACGAG GTGTTCGCAGACAGTGAAACAGGCAATTTTCCTTTAAATGTATCACGTAGCEST: gi|169064930|gb|FE475626.1|FE475626
genomic: CAATGCGTGGAAGTTTTCCTTTAAATGGCACCTATTTCCAAGTGAACGAGgtaatattcc ... tcgtgtgtagGTGTTCGCAGACAGTGAAACAGGCAATTTTCCTTTAAATGTATCACGTAGC
EST: CAATGCGTGGAAGTTTTCCTTTAAATGGCACCTATTTCCAAGTGAACGAG GTGTTCGCAGACAGTGAAACAGGCAATTTTCCTTTAAATGTATCACGTAGC
genomic: CAATGCGTGGAAGTTTTCCTTTAAATGGCACCTATTTCCAAGTGAACGAGgtaatattcc ... tcgtgtgtagGTGTTCGCAGACAGTGAAACAGGCAATTTTCCTTTAAATGTATCACGTAGC
gtaatattccattgctcctttcacttaatatttgactctcttgctcgtgtgtagGTGTTCGCAGACAGTGAAACAGGCAATTTTCCTTTAAATGTATCACGTAGCCTTTTGTGGAATTTGCATCGAAAGTTTGTATACTTCGGAACATCAGTTC
atttgac putative branch site (score: 15)
ctctcttgctc CT-rich tract
tttcacttaatattt TA-rich tract