1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' |
gtatttctcatgtttaactcgaaagagcccaatacacgtacgtccgcatgcagACGGATGATCTAGAAGGCCACATGATAGTTTGTGGATTTGGTCGAGTCGGCCAG
species | Selaginella moellendorffii |
transcript | EFJ10973 |
intron # | 11 |
splice site | 3' |
intron type | U2 |
EST: CAAAGTTCGACCAGCAGGACGTCCGAAGCCTGCTACCTGCAGAGAACGAG ACGGATGATCTAGAANGCCACATGATAGTTTGTGGATTTGGTCGAGTCGGCEST: gi|169019927|gb|FE431018.1|FE431018
genomic: CAAAGTTCGACCAGCAGGACGTCCGAAGCCTGCTACCTGCAGAGAACGAGgtatttctca ... ccgcatgcagACGGATGATCTAGAAGGCCACATGATAGTTTGTGGATTTGGTCGAGTCGGC
EST: CAAAGTTCGACCAGCAGGACGTCCGAAGCCTGCTACCTGCAGAGAACGAG ACGGATGATCTAGAAGGCCACATGATAGTTTGTGGATTTGGTCGAGTCGGCEST: gi|169059436|gb|FE467539.1|FE467539
genomic: CAAAGTTCGACCAGCAGGACGTCCGAAGCCTGCTACCTGCAGAGAACGAGgtatttctca ... ccgcatgcagACGGATGATCTAGAAGGCCACATGATAGTTTGTGGATTTGGTCGAGTCGGC
EST: CAAAGTTCGACCAGCAGGACGTCCGAAGCCTGCTACCTGCAGAGAACGAG ACGGATGATCTAGAAGGCCACATGATAGTTTGTGGATTTGGTCGAGTCGGCEST: gi|169052984|gb|FE460699.1|FE460699
genomic: CAAAGTTCGACCAGCAGGACGTCCGAAGCCTGCTACCTGCAGAGAACGAGgtatttctca ... ccgcatgcagACGGATGATCTAGAAGGCCACATGATAGTTTGTGGATTTGGTCGAGTCGGC
EST: ACCAGCAGGACGTCCGAAGCCTGCTACCTGCAGAGAACGAG ACGGATGATCTAGAAGGCCACATGATAGTTTGTGGATTTGGTCGAGTCGGC
genomic: ACCAGCAGGACGTCCGAAGCCTGCTACCTGCAGAGAACGAGgtatttctca ... ccgcatgcagACGGATGATCTAGAAGGCCACATGATAGTTTGTGGATTTGGTCGAGTCGGC
gtatttctcatgtttaactcgaaagagcccaatacacgtacgtccgcatgcagACGGATGATCTAGAAGGCCACATGATAGTTTGTGGATTTGGTCGAGTCGGCCAG
gtttaac putative branch site (score: 34)
atgtttaa TA-rich tract