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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

tactcatccagaaaacatgatcaaagttttcacgggaatttttcttcgtttgtttgacaatgcagTTGTATAAGGTGAGAGAGGAGAAGTACCTTCTCGACCTCCAGAAGCTTGAAGGCCCGTTTTTTATCTTTCTCGATTTTTGTGGCTCCTTCCTGGCCGAGC

Basic information

species Selaginella moellendorffii
transcript EFJ10631
intron # 11
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

gaaaacatgatcaaagttttcacgggaatttttcttcgtttgtttgacaatgcagTTGTATAAGGTGAGAGAGGAGAAGTACCTTCTCGACCTCCAGAAGCTTGAAGGCCCGTTTTTTATCTTTCTCGATTTTTGTGGCTCCTTCCTGGCCGAGC
                                         gtttgac  putative branch site (score: 4)
                          aatttttctt  TA-rich tract