1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
gtaagggaagagagaaaattttcttcgattcttttgatttcgtgctgcttagaaatctttgcgcagGGATTTCTCTCAAGACGCAGGAGCTCTATGCCCTCGTCTTTGCGACGCGCTACTTGGATATTTTCACGCACCATGTCTCGCTCTATAACACGGTGATGAA
species | Selaginella moellendorffii |
transcript | EFJ33020 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: CAGCGTCGTGGTGCTGCTGCTCAAGATCCACACCATCAAGTCTTGCGCCG GGATTTCTCTCAAGACGCAGGAGCTCTATGCCCTCGTCTTTGCGACGCGCTEST: gi|169059929|gb|FE467291.1|FE467291
genomic: CAGCGTCGTGGTGCTGCTGCTCAAGATCCACACCATCAAGTCTTGCGCCGgtaagggaag ... ctttgcgcagGGATTTCTCTCAAGACGCAGGAGCTCTATGCCCTCGTCTTTGCGACGCGCT
EST: CTGCTGCTCAAGATCCACACCATCAAGTCTTGCGCCG GGATTTCTCTCAAGACGCAGGAGCTCTATGCCCTCGTCTTTGCGACGCGCTEST: gi|169046459|gb|FE454746.1|FE454746
genomic: CTGCTGCTCAAGATCCACACCATCAAGTCTTGCGCCGgtaagggaag ... ctttgcgcagGGATTTCTCTCAAGACGCAGGAGCTCTATGCCCTCGTCTTTGCGACGCGCT
EST: CGTCGTGGTGCTGCTGCTCAAGATCCACACCATCAAGTCTTGCGCCG GGATTTCTCTCAAGACGCAGGAGCTCTATGCCCTCGTCTNTGCGACGCGCTEST: gi|169111123|gb|FE509372.1|FE509372
genomic: CGTCGTGGTGCTGCTGCTCAAGATCCACACCATCAAGTCTTGCGCCGgtaagggaag ... ctttgcgcagGGATTTCTCTCAAGACGCAGGAGCTCTATGCCCTCGTCTTTGCGACGCGCT
EST: CAGCGTCGTGGTGCTGCTGCTCAAGATCCACACCATCAAGTCTTGCGCCG GGATTTCTCTCAAGACGCAGGAGCTCTATGCCCTCGTCTTTGCGACGCGCTEST: gi|169036709|gb|FE444930.1|FE444930
genomic: CAGCGTCGTGGTGCTGCTGCTCAAGATCCACACCATCAAGTCTTGCGCCGgtaagggaag ... ctttgcgcagGGATTTCTCTCAAGACGCAGGAGCTCTATGCCCTCGTCTTTGCGACGCGCT
EST: CAGCGTCGTGGTGCTGCTGCTCAAGATCCACACCATCAAGTCTTGCGCCG GGATTTCTCTCAAGACGCAGGAGCTCTATGCCCTCGTCTTTGCGACGCGCTEST: gi|169051950|gb|FE460081.1|FE460081
genomic: CAGCGTCGTGGTGCTGCTGCTCAAGATCCACACCATCAAGTCTTGCGCCGgtaagggaag ... ctttgcgcagGGATTTCTCTCAAGACGCAGGAGCTCTATGCCCTCGTCTTTGCGACGCGCT
EST: CAGCGTCGTGGTGCTGCTGCTCAAGATCCACACCATCAAGTCTTGCGCCG GGATTTCTCTCAAGACGCAGGAGCTCTATGCCCTCGTCTTTGCGACGCGCTEST: gi|169112069|gb|FE510721.1|FE510721
genomic: CAGCGTCGTGGTGCTGCTGCTCAAGATCCACACCATCAAGTCTTGCGCCGgtaagggaag ... ctttgcgcagGGATTTCTCTCAAGACGCAGGAGCTCTATGCCCTCGTCTTTGCGACGCGCT
EST: CAGCGTCGTGGTGCTGCTGCTCAAGATCCACACCATCAAGTCTTGCGCCG GGATTTCTCTCAAGACGCAGGAGCTCTATGCCCTCGTCTTTGCGACGCGCTEST: gi|169053109|gb|FE463008.1|FE463008
genomic: CAGCGTCGTGGTGCTGCTGCTCAAGATCCACACCATCAAGTCTTGCGCCGgtaagggaag ... ctttgcgcagGGATTTCTCTCAAGACGCAGGAGCTCTATGCCCTCGTCTTTGCGACGCGCT
EST: CAGCGTCGTGGTGCTGCTGCTCAAGATCCACACCATCAAGTCTTGCGCCG GGATTTCTCTCAAGACGCAGGAGCTCTATGCCCTCGTCTTTGCGACGCGCTEST: gi|169046473|gb|FE454747.1|FE454747
genomic: CAGCGTCGTGGTGCTGCTGCTCAAGATCCACACCATCAAGTCTTGCGCCGgtaagggaag ... ctttgcgcagGGATTTCTCTCAAGACGCAGGAGCTCTATGCCCTCGTCTTTGCGACGCGCT
EST: CAGCGTCGTGGTGCTGCTGCTCAAGATCCACACCATCAAGTCTTGCGCCG GGATTTCTCTCAAGACGCAGGAGCTCTATGCCCTCGTCTTTGCGACGCGCTEST: gi|169064230|gb|FE471585.1|FE471585
genomic: CAGCGTCGTGGTGCTGCTGCTCAAGATCCACACCATCAAGTCTTGCGCCGgtaagggaag ... ctttgcgcagGGATTTCTCTCAAGACGCAGGAGCTCTATGCCCTCGTCTTTGCGACGCGCT
EST: CAGCGTCGTGGTGCTGCTGCTCAAGATCCACACCATCAAGTCTTGCGCCG GGATTTCTCTCAAGACGCAGGAGCTCTATGCCCTCGTCTTTGCGACGCGCTEST: gi|169059930|gb|FE467292.1|FE467292
genomic: CAGCGTCGTGGTGCTGCTGCTCAAGATCCACACCATCAAGTCTTGCGCCGgtaagggaag ... ctttgcgcagGGATTTCTCTCAAGACGCAGGAGCTCTATGCCCTCGTCTTTGCGACGCGCT
EST: CAGCGTCGTGGTGCTGCTGCTCAAGATCCACACCATCAAGTCTTGCGCCG GGATTTCTCTCAAGACGCAGGAGCTCTATGCCCTCGTCTTTGCGACGCGCTEST: gi|169103529|gb|FE507597.1|FE507597
genomic: CAGCGTCGTGGTGCTGCTGCTCAAGATCCACACCATCAAGTCTTGCGCCGgtaagggaag ... ctttgcgcagGGATTTCTCTCAAGACGCAGGAGCTCTATGCCCTCGTCTTTGCGACGCGCT
EST: CAGCGTCGTGGTGCTGCTGCTCAAGATCCACACCATCAAGTCTTGCGCCG GGATTTCTCTCAAGACGCAGGAGCTCTATGCCCTCGTCTTTGCGACGCGCTEST: gi|169053108|gb|FE463007.1|FE463007
genomic: CAGCGTCGTGGTGCTGCTGCTCAAGATCCACACCATCAAGTCTTGCGCCGgtaagggaag ... ctttgcgcagGGATTTCTCTCAAGACGCAGGAGCTCTATGCCCTCGTCTTTGCGACGCGCT
EST: TGCTGCTCAAGATCCACACCATCAAGTCTTGCGCCG GGATTTCTCTCAAGACGCAGGAGCTCTATGCCCTCGTCTNTGCGACGCGCT
genomic: TGCTGCTCAAGATCCACACCATCAAGTCTTGCGCCGgtaagggaag ... ctttgcgcagGGATTTCTCTCAAGACGCAGGAGCTCTATGCCCTCGTCTTTGCGACGCGCT
gagaaaattttcttcgattcttttgatttcgtgctgcttagaaatctttgcgcagGGATTTCTCTCAAGACGCAGGAGCTCTATGCCCTCGTCTTTGCGACGCGCTACTTGGATATTTTCACGCACCATGTCTCGCTCTATAACACGGTGATGAA
ttttgat putative branch site (score: 17)
tctttgc putative PPT
aattttctt TA-rich tract