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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtaagcactgctcgatcagctcaggcgctcgcatttctctcgcggctgatcgcattccttcctctctctccagGTGCCTACAAGTACATCGAGGAGCTATGGCGGAAGAAGCAATCCGATGTGATGCGCTTCCTGATGCGCGTCCGCTGCTGGGAGTATCGCCAGCTCCCCGG

Basic information

species Selaginella moellendorffii
transcript EFJ27946
intron # 1
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: EFJ27946 (Selaginella moellendorffii), 3'ss of exon 1
lower sequence: LOC_Os05g19370.1 (Oryza sativa), 3'ss of exon 1
---------------------gtaagcactgc-tcgatcagctcaggcgctcgcatttctctcgcggctgatcgcattccttcctctctctccagGTGCCTACAAGTACATCGAGGAGCTATGGCGGAAGAAGCAATCCGATGTGATGCGCTTCCTGATGCGCGTCCGCTGCTGGGAGTATCGCCAGCTCCCCGG
                     |   |  |  | |||| |  | |   |  || |   |||||   |      |   ||  | |  |    | |||| || ||||||||| |   |||||||||| ||| |||||| || || |||||| | ||| ||  |||||| |||||||||||||| |||||||  || | 
gtgagctcctcctcctcctccgcctgttcctcgtcgacctccccctaca-tctctcctctcttctgatgcgcccggtttttgctgcgaggtgcagGGGCGTACAAGTACGTGTCGGAGCTATGGAGGAGGAAGCAGTCGGACGTGATGAGGTTCGTGCAGCGCGTGCGCTGCTGGGAGTACCGCCAGCAGCCGGC

upper sequence: EFJ27946 (Selaginella moellendorffii), 3'ss of exon 1
lower sequence: GRMZM2G034794_T02 (Zea mays), 3'ss of exon 1
-------------gtaagcactgctcgatcagctcaggcgctcgcatttctctcgcggctgatcgcattccttcctctctct---ccagGTGCCTACAAGTACATCGAGGAGCTATGGCGGAAGAAGCAATCCGATGTGATGCGCTTCCTGATGCGCGTCCGCTGCTGGGAGTATCGCCAGCTCCCCGG
              | | | ||| | |     |  |  |||  || |   |||  | |    ||| ||   ||  || || |    ||||||| ||||||||| ||  |||||||||||||| |||||| |||||||||||||| ||| ||  |||||| ||||||||||||||  | ||||  || | 
gtgagctctcgtatttaccgctgatggcctctccgattcgcatgcgtgggtcttaccgtgtgtcgtatcattttgtcgctgtggcacagGTGCGTACAAGTACGTCTCGGAGCTATGGCGGAGGAAGCAGTCCGATGTGATGCGGTTCGTGCAGCGCGTGCGCTGCTGGGAGTACAGGCAGCAGCCGGC

upper sequence: EFJ27946 (Selaginella moellendorffii), 3'ss of exon 1
lower sequence: GRMZM2G180724_T01 (Zea mays), 3'ss of exon 1
gtaagc-----actgctcgatcagctcagg--cgctcgcattt-ctctcgcggctgatcgcattccttc-ctctctctc-cagGTGCCTACAAGTACATCGAGGAGCTATGGCGGAAGAAGCAATCCGATGTGATGCGCTTCCTGATGCGCGTCCGCTGCTGGGAGTATCGCCAGCTCCCCGG
|| ||       || |  |  |  ||| |   |||  ||||    | |  |||    | ||||   ||| | || |  | |||| || ||||||||  ||  |||| ||||| ||| |||||||||||| |||||||| ||| ||  |||||| ||||||||||||||  | ||||  || | 
gtgagttctcggctacaaggccgtctccgattcgcatgcatgggtttttacggtatgttgcatcgtttctcgctgtggcgcagGGGCGTACAAGTATGTCTCGGAGTTATGGAGGAGGAAGCAATCCGACGTGATGCGGTTCGTGCAGCGCGTGCGCTGCTGGGAGTACAGGCAGCAGCCGGC

upper sequence: EFJ27946 (Selaginella moellendorffii), 3'ss of exon 1
lower sequence: GRMZM2G024354_T01 (Zea mays), 3'ss of exon 1
----gtaagcactgctcgatcagctcaggcgctcgcatttct-ctcgcggctgatcgc--attccttcctctctctccagGTGCCTACAAGTACATCGAGGAGCTATGGCGGAAGAAGCAATCCGATGTGATGCGCTTCCTGATGCGCGTCCGCTGCTGGGAGTATCGCCAGCTCCCCGG
    | ||    |    | ||    |  ||   || |  | | | ||  |    || |  ||    |  ||      |||| || ||||||||| |   ||| |||||| ||| |||||| || || |||||||||||| ||  |||||| ||||||||||||||  | ||||  ||   
gtgagcaaatgttctgtggtctctccgtgcaggcgaacctttgcgcgtcgtctctctctgatagtctgttcgtcgcgcagGGGCGTACAAGTACGTGTCGGAACTATGGAGGAGGAAGCAGTCGGACGTGATGCGCTTCGTGCAGCGCGTGCGCTGCTGGGAGTACAGGCAGCAGCCGTC

upper sequence: EFJ27946 (Selaginella moellendorffii), 3'ss of exon 1
lower sequence: Vv16s0013g02020.t01 (Vitis vinifera), 3'ss of exon 1
---------------------------gtaagcactgct--cgatcag---ctcaggcgctcgcatttct--ctcgcggctgatcgcattccttcctctctctccagGTGCCTACAAGTACATCGAGGAGCTATGGCGGAAGAAGCAATCCGATGTGATGCGCTTCCTGATGCGCGTCCGCTGCTGGGAGTATCGCCAGCTCCCCGG
                            |   | || ||  | | | |    |  ||   ||  |||| |  ||  | | |  | |||||  |     |  |   ||| || ||||||||| |   |||||||||| ||||||||||||||||||||||| | ||| ||  | | ||  | ||||||||||||||||||| |||   
gtaagcaccaagctttccttcactctctttttctctacttccaagcggatattagggttttccgatttgtggcttcctgttattggcattgttcgtggtggcattagGGGCTTACAAGTACGTGTCGGAGCTATGGAGGAAGAAGCAATCCGATGTGATGAGGTTCTTGCAGAGGGTGAGGTGCTGGGAGTATCGCCAGCACCCTTC

upper sequence: EFJ27946 (Selaginella moellendorffii), 3'ss of exon 1
lower sequence: EDP06755 (Chlamydomonas reinhardtii), 3'ss of exon 1
-----------gtaagcactgctcgatcagct-caggcgctcgc-atttctctcgcggctgatcgcattccttcctctctctccagGTGCCTACAAGTACATCGAGGAGCTATGGCGGAAGAAGCAATCCGATGTGATGCGCTTCCTGATGCGCGTCCGCTGCTGGGAGTATCGCCAGCTCCCCGG-----------
             ||||      | | || || ||| |||  ||      ||||    || |    | |  |  |||| ||    |   ||  || |||||| |||||||| ||||| ||||||||   ||||||| | ||||||||| |||| || |||||||||||||| |||||| | ||| |           
gtgcgatagctcaaagcctcataccagcatctgcagccgccggccgacattctctgaacttacgcgactggtcgctctttccttggac-cccgca-gTACATTGAGGAGCTGTGGCGCAAGAAGCAGAGCGATGTGCTCCGCTTCCTGCTGCGTGTGCGCTGCTGGGAGTACCGCCAGATGCCCAGCTGCGTGCGCC

upper sequence: EFJ27946 (Selaginella moellendorffii), 3'ss of exon 1
lower sequence: PP1S152_141V6.1 (Physcomitrella patens), 3'ss of exon 1
----------------------------------------------------------------------------------------------gtaagcactgctcgatcagctcaggcgctcgca-----tttctctcgcggctgatcgcattccttcctctctctccagGTGCCTACAAGTACATCGAGGAGCTATGGCGGAAGAAGCAATCCGATGTGATGCGCTTCCTGATGCGCGTCCGCTGCTGGGAGTATCGCCAGCTCCCCGG
                                                                                               | ||   ||| |  |  | ||  |  ||  |      ||| | |      |  |    ||  ||    |  |||||||||| |||||||||||||||||||| ||| |||||||||| || |||||| |||| ||| || |||| || ||||||||||||||  | |||||||||||
gtattcattcccagctccctctctctctagcgctgcgtagctgcgtagctgcgtttttttattttttttattttttatttttttccctttccttttgaggtttgcgcagtgtgatcgagatctaactggagttttttttttttttttttttttttttttaaatttcctccagGTGCGTACAAGTACATCGAGGAGCTGTGGAGGAAGAAGCAGTCTGATGTGCTGCGTTTCTTGCTGCGTGTGCGCTGCTGGGAGTACAGGCAGCTCCCCGG

upper sequence: EFJ27946 (Selaginella moellendorffii), 3'ss of exon 1
lower sequence: PP1S134_151V6.1 (Physcomitrella patens), 3'ss of exon 1
----------------------------------------------------gtaagcactgctcgatcagctcaggcgctcgcatttctctcgcggctgatcgcattccttcctctctctccagGTGCCTACAAGTACATCGAGGAGCTATGGCGGAAGAAGCAATCCGATGTGATGCGCTTCCTGATGCGCGTCCGCTGCTGGGAGTATCGCCAGCTCCCCGG
                                                    | |      ||  || ||| |  ||         |   |      ||       ||  ||  |     |  |||||| ||||||||||| |||||||| ||| ||||||| || ||||||||| ||||||||||| |||| || ||||||||||||||  | ||||| |||||
gtaagcaatttctcgcagcctctgccctcgtcatggatctctgtgtgtatgtggagctgacgcctgaccagattcggaatgaattctcaacctttaactagggtttttgttttgttgaattttagGTGCGTACAAGTACATTGAGGAGCTGTGGAGGAAGAAACAGTCCGATGTGCTGCGCTTCCTGCTGCGTGTTCGCTGCTGGGAGTACAGGCAGCTGCCCGG

upper sequence: EFJ27946 (Selaginella moellendorffii), 3'ss of exon 1
lower sequence: PP1S7_364V6.1 (Physcomitrella patens), 3'ss of exon 1
--------------------gtaag--cactgctcgatcagct-caggcgctcgcatttctctcgcggctgatc-gcattcctt---cctctctctccagGTGCCTACAAGTACATCGAGGAGCTATGGCGGAAGAAGCAATCCGATGTGATGCGCTTCCTGATGCGCGTCCGCTGCTGGGAGTATCGCCAGCTCCCCGG
                    ||  |  || |    | |  |   |  | |    | ||  | | | |  |  |  | | |   |     |   || ||||| || ||||||||||| ||||||||||||||||||||||| ||||| ||| |||| ||| || | || || ||||||||||||||  | || || |||||
gctttgtgttgtttggtagggttgggccattcgatggttggtgacgagagagtccgttaatgttgggttttttttgtaatgtgtgaatttggttccccagGCGCGTACAAGTACATTGAGGAGCTATGGCGGAAGAAGCAGTCCGACGTGCTGCGTTTCTTGCTTCGTGTGCGCTGCTGGGAGTACAGACAACTACCCGG

upper sequence: EFJ27946 (Selaginella moellendorffii), 3'ss of exon 1
lower sequence: PP1S28_15V6.1 (Physcomitrella patens), 3'ss of exon 1
------------------gtaagcactgctcgat-----cagctcaggcgc-tcgcatttc---tctcgcggctgatcgcattccttcctctctctccagGTGCCTACAAGTACATCGAGGAGCTATGGCGGAAGAAGCAATCCGATGTGATGCGCTTCCTGATGCGCGTCCGCTGCTGGGAGTATCGCCAGCTCCCCGG
                      |   ||||  ||      ||    ||||  | |  | |    | ||| ||        |||  ||    | | |  ||| || ||||| ||||| ||||||||||||||||||||||| ||||||||| |||| ||| || | || || ||||||||||||||  | ||||| |||||
cttcgatagctacgttgcaccggtgttgcttcatgttgttagtgttggcgaattgtgtatggggtttcggggtcttatttatttgttttggtttgtttagGGGCGTACAAATACATTGAGGAGCTATGGCGGAAGAAGCAGTCCGATGTGTTGCGATTCTTGCTTCGTGTGCGCTGCTGGGAGTACAGGCAGCTTCCCGG

upper sequence: EFJ27946 (Selaginella moellendorffii), 3'ss of exon 1
lower sequence: PP1S34_445V6.1 (Physcomitrella patens), 3'ss of exon 1
------------------------gtaagcactgctcgatcagctcaggcgctc--gcatttctctcgcggctgatcgcattccttcctctctctc-cagGTGCCTACAAGTACATCGAGGAGCTATGGCGGAAGAAGCAATCCGATGTGATGCGCTTCCTGATGCGCGTCCGCTGCTGGGAGTATCGCCAGCTCCCCGG
                          ||  |  | ||  || | || |    |   |  ||  |     |  || | | |||  ||  | |  ||| |||| |||||||||||||| |||||| | |||||||||||||| || |||||| |||| ||  || |||| || ||||||||||||||  | |||||||||||
ttggtgcaatgctgttcaattttcacaattagagttccgtcggttcggagttttaggtgttgattgtctgattgttggtatttattgattttgctctcagGCGCCTACAAGTACATTGAGGAGTTGTGGCGGAAGAAGCAGTCTGATGTGCTGCGGTTTTTGCTGCGTGTGCGCTGCTGGGAGTACAGGCAGCTCCCCGG

upper sequence: EFJ27946 (Selaginella moellendorffii), 3'ss of exon 1
lower sequence: PP1S68_114V6.1 (Physcomitrella patens), 3'ss of exon 1
-----------------gtaagcactgctcg--atca-gctcaggcgctcg-----catttctctcgcggctgatcgcattcctt--cctctctctccagGTGCCTACAAGTACATCGAGGAGCTATGGCGGAAGAAGCAATCCGATGTGATGCGCTTCCTGATGCGCGTCCGCTGCTGGGAGTATCGCCAGCTCCCCGG
                  | |    || | |  || |   | |||   | |     |  |  |  |  |  || |    |    |   ||   ||| |||| || ||||||||||| || ||||||||| |||||||||| || |||||| |||| |||||  |||| || || |||||||||||  | |||||||| ||
ggttgttggtagtgtttttgattgttgattggaatgacatttagggttttgggaaacggtggttacatgcatgtttatgtcaaatgatcttgttctgcagGCGCGTACAAGTACATTGAAGAGCTATGGAGGAAGAAGCAGTCTGATGTGCTGCGATTCCTATTGCGTGTGCGATGCTGGGAGTACAGGCAGCTCCCAGG

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|169047288|gb|FE456537.1|FE456537
EST:     GAGGAGCTGCGCCTTCGCGCCGATGG                         GTGCCTACAAGTACATCGAGGAGCTATGGCGGAAGAAGCAATCCGATGTGA
genomic: GAGGAGCTGCGCCTTCGCGCCGATGGgtaagcactg ... ctctctccagGTGCCTACAAGTACATCGAGGAGCTATGGCGGAAGAAGCAATCCGATGTGA
EST: gi|169058518|gb|FE464244.1|FE464244
EST:     GGTTTGGAAGAGGAGCTGCGCCTTCGCGCCGATGG                         GTGCCTACAAATACATCGAGGAGCTATGGCGGAAGAAGCAATCCGATGTGA
genomic: GGTTTGGAGGAGGAGCTGCGCCTTCGCGCCGATGGgtaagcactg ... ctctctccagGTGCCTACAAGTACATCGAGGAGCTATGGCGGAAGAAGCAATCCGATGTGA
EST: gi|169070557|gb|FE479834.1|FE479834
EST:     GAGGAGCTGCGCCTTCGCGCCGATGG                         GTGCCTACAAATACATCGAGGAGCTATGGCGGAAGAAGCAATCCGATGTGA
genomic: GAGGAGCTGCGCCTTCGCGCCGATGGgtaagcactg ... ctctctccagGTGCCTACAAGTACATCGAGGAGCTATGGCGGAAGAAGCAATCCGATGTGA
EST: gi|169063696|gb|FE471802.1|FE471802
EST:     CTGGTTTGGAAGAGGAGCTGCGCCTTCGCGCCGATGG                         GTGCCTACAAATACATCGAGGAGCTATGGCGGAAGAAGCAATCCGATGTGA
genomic: CTGGTTTGGAGGAGGAGCTGCGCCTTCGCGCCGATGGgtaagcactg ... ctctctccagGTGCCTACAAGTACATCGAGGAGCTATGGCGGAAGAAGCAATCCGATGTGA
EST: gi|169101168|gb|FE501925.1|FE501925
EST:     AGGAGCTGCGCCTTCGCGCCGATGG                         GTGCCTACAAGTACATCGAGGAGCTATGGCGGAAGAAGCAATCCGATGTGA
genomic: AGGAGCTGCGCCTTCGCGCCGATGGgtaagcactg ... ctctctccagGTGCCTACAAGTACATCGAGGAGCTATGGCGGAAGAAGCAATCCGATGTGA
EST: gi|169101169|gb|FE501926.1|FE501926
EST:     GGCTGGTTTGGAGGAGGAGCTGCGCCTTCGCGCCGATGG                         GTGCCTACAAGTACATCGAGGAGCTATGGCGGAAGAAGCAATCCGATGTGA
genomic: GGCTGGTTTGGAGGAGGAGCTGCGCCTTCGCGCCGATGGgtaagcactg ... ctctctccagGTGCCTACAAGTACATCGAGGAGCTATGGCGGAAGAAGCAATCCGATGTGA
EST: gi|169073901|gb|FE482991.1|FE482991
EST:     GCCGTCGGCTGGTTTGGAAGAGGAGCTGCGCCTTCGCGCCGATGG                         GTGCCTACAAATACATCGAGGAGCTATGGCGGAAGAAGCAATCCGATGTGA
genomic: GCCGTCGGCTGGTTTGGAGGAGGAGCTGCGCCTTCGCGCCGATGGgtaagcactg ... ctctctccagGTGCCTACAAGTACATCGAGGAGCTATGGCGGAAGAAGCAATCCGATGTGA
EST: gi|169021073|gb|FE430682.1|FE430682
EST:     GGAGGAGGAGCTGCGCCTTCGCGCCGATGG                         GTGCCTACAAGTACATCGAGGAGCTATGGCGGAAGAAGCAATCCGATGTGA
genomic: GGAGGAGGAGCTGCGCCTTCGCGCCGATGGgtaagcactg ... ctctctccagGTGCCTACAAGTACATCGAGGAGCTATGGCGGAAGAAGCAATCCGATGTGA
EST: gi|169038351|gb|FE443985.1|FE443985
EST:     GTTTGGAAGAGGAGCTGCGCCTTCGCGCCGATGG                         GTGCCTACAAATACATCGAGGAGCTATGGCGGAAGAAGCAATCCGATGTGA
genomic: GTTTGGAGGAGGAGCTGCGCCTTCGCGCCGATGGgtaagcactg ... ctctctccagGTGCCTACAAGTACATCGAGGAGCTATGGCGGAAGAAGCAATCCGATGTGA
EST: gi|169058895|gb|FE468729.1|FE468729
EST:     TGGTTTGGAGGAGGAGCTGCGCCTTCGCGCCGATGG                         GTGCCTACAAGTACATCGAGGAGCTATGGCGGAAGAAGCAATCCGATGTGA
genomic: TGGTTTGGAGGAGGAGCTGCGCCTTCGCGCCGATGGgtaagcactg ... ctctctccagGTGCCTACAAGTACATCGAGGAGCTATGGCGGAAGAAGCAATCCGATGTGA
EST: gi|169021074|gb|FE430683.1|FE430683
EST:     GGAGGAGGAGCTGCGCCTTCGCGCCGATGG                         GTGCCTACAAGTACATCGAGGAGCTATGGCGGAAGAAGCAATCCGATGTGA
genomic: GGAGGAGGAGCTGCGCCTTCGCGCCGATGGgtaagcactg ... ctctctccagGTGCCTACAAGTACATCGAGGAGCTATGGCGGAAGAAGCAATCCGATGTGA
EST: gi|70670086|gb|DN838663.1|DN838663
EST:     CTTTAGCCGTCGGCTGGTTTGGAGGAGGAGCTGCGCCTTCGCGCCGATGG                         GTGCCTACAAGTACATCGAGGAGCTATGGCGGAAGAAGCAATCCGATGTGA
genomic: CTTTAGCCGTCGGCTGGTTTGGAGGAGGAGCTGCGCCTTCGCGCCGATGGgtaagcactg ... ctctctccagGTGCCTACAAGTACATCGAGGAGCTATGGCGGAAGAAGCAATCCGATGTGA
EST: gi|169047289|gb|FE456538.1|FE456538
EST:     GAGGAGCTGCGCCTTCGCGCCGATGG                         GTGCCTACAAGTACATCGAGGAGCTATGGCGGAAGAAGCAATCCGATGTGA
genomic: GAGGAGCTGCGCCTTCGCGCCGATGGgtaagcactg ... ctctctccagGTGCCTACAAGTACATCGAGGAGCTATGGCGGAAGAAGCAATCCGATGTGA
EST: gi|169073900|gb|FE482990.1|FE482990
EST:     GCCGTCGGCT-GTTTGAAAGAGGAGCTGCGCCTTCGCGCCGATGG                         GTGCCTACAAATACATCGAGGAGCTATGGCGGAAGAAGCAATCCGATGTGA
genomic: GCCGTCGGCTGGTTTGGAGGAGGAGCTGCGCCTTCGCGCCGATGGgtaagcactg ... ctctctccagGTGCCTACAAGTACATCGAGGAGCTATGGCGGAAGAAGCAATCCGATGTGA
EST: gi|169058517|gb|FE464243.1|FE464243
EST:     CTGGTTTGGAAGAGGAGCTGCGCCTTCGCGCCGATGG                         GTGCCTACAAATACATCGAGGAGCTATGGCGGAAGAAGCAATCCGATGTGA
genomic: CTGGTTTGGAGGAGGAGCTGCGCCTTCGCGCCGATGGgtaagcactg ... ctctctccagGTGCCTACAAGTACATCGAGGAGCTATGGCGGAAGAAGCAATCCGATGTGA
EST: gi|169070556|gb|FE479833.1|FE479833
EST:     GGAGCTGCGCCTTCGCGCCGATGG                         GTGCCTACAAATACATCGAGGAGCTATGGCGGAAGAAGCAATCCGATGTGA
genomic: GGAGCTGCGCCTTCGCGCCGATGGgtaagcactg ... ctctctccagGTGCCTACAAGTACATCGAGGAGCTATGGCGGAAGAAGCAATCCGATGTGA

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 33 (upstream exon), 35 (downstream exon)
Score: 44

AGGGTTAGGGCTTTAGCCGTCGGCTGGTTTGGAGGAGGAGCTGCGCCTTCGCGCCGATGGgtaagcactg ... ctctctccagGTGCCTACAAGTACATCGAGGAGCTATGGCGGAAGAAGCAATCCGATGTGATGCGCTTCCTGATGCGCGTCCGCTGCTGGGAGTATCGCCAGCTCCCCGG




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 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

gctcaggcgctcgcatttctctcgcggctgatcgcattccttcctctctctccagGTGCCTACAAGTACATCGAGGAGCTATGGCGGAAGAAGCAATCCGATGTGATGCGCTTCCTGATGCGCGTCCGCTGCTGGGAGTATCGCCAGCTCCCCGG
                         ggctgat  putative branch site (score: 44)
                               tcgcattccttcctct  CT-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
gtaagcactgctcgatcagctcaggcgctcgcatttctctcgcggctgatcgcattccttcctctctctccagGTGCCTACAAGTACATCGAGGAGCTATGGCGGAAGAAGCAATCCGATGTGATGCGCTTCCTGATGCGCGTCCGCTGCTGGGAGTATCGCCAGCTCCCCGG

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GCTGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGCTC