1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
gtaatcccgatcatgccatgaattcctggatccattccagcgcatgcattctctgttctcttcgatctcccggttcgatctcactggttttgctggaaatttctagCTATCAGAGCTCAAGTGGCAACGGCGACCGAGCCCTCTCACGAGCCAACGAAATTAGTCGAAGCTCCTGTGTCAGTGGTGACTGGTGCTTCGCGAGGGAT
species | Selaginella moellendorffii |
transcript | EFJ26070 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: TCTCCAGCTCTGCTCCAGTCTAGGCGTCAGATCATCGTGTTCTTCGTCAG CTATCAGAGCTCAAGTGGCAACGGCGACCGAACCCTCTCACGAGGCAACGAEST: gi|169066404|gb|FE474627.1|FE474627
genomic: TCTCCAGCTCTGCTCCAGTCTAAGCGTCAGATCATCGTGTTCTTCGTCAGgtaatcccga ... aaatttctagCTATCAGAGCTCAAGTGGCAACGGCGACCGAGCCCTCTCACGAGCCAACGA
EST: TCTCCAGCTCTGCTCCAGTCTAGGCGTCAGATCATCGTGTTCTTCGTCAG CTATCAGAGCTCAAGTGGCAACGGCGACCGAACCCTCTCACGAGGCAACGAEST: gi|70671166|gb|DN839743.1|DN839743
genomic: TCTCCAGCTCTGCTCCAGTCTAAGCGTCAGATCATCGTGTTCTTCGTCAGgtaatcccga ... aaatttctagCTATCAGAGCTCAAGTGGCAACGGCGACCGAGCCCTCTCACGAGCCAACGA
EST: TCTCCAGCTCTGCTCCAGTCTAGGCGTCAGATCATCGTGTTCTTCGTCAG CTATCAGAGCTCAAGTGGCAACGGCGACCGAACCCTCTCACGAGGCAACGAEST: gi|169105719|gb|FE508485.1|FE508485
genomic: TCTCCAGCTCTGCTCCAGTCTAAGCGTCAGATCATCGTGTTCTTCGTCAGgtaatcccga ... aaatttctagCTATCAGAGCTCAAGTGGCAACGGCGACCGAGCCCTCTCACGAGCCAACGA
EST: TCTCCAGCTCTGCTCCAGTCTAAGCGTCAGATCATCGTGTTCTTCGTCAG CTATCAGAGCTCAAGTGGCAACGGCGACCGAGCCCTCTCACGAGCCAACGA
genomic: TCTCCAGCTCTGCTCCAGTCTAAGCGTCAGATCATCGTGTTCTTCGTCAGgtaatcccga ... aaatttctagCTATCAGAGCTCAAGTGGCAACGGCGACCGAGCCCTCTCACGAGCCAACGA
tctgttctcttcgatctcccggttcgatctcactggttttgctggaaatttctagCTATCAGAGCTCAAGTGGCAACGGCGACCGAGCCCTCTCACGAGCCAACGAAATTAGTCGAAGCTCCTGTGTCAGTGGTGACTGGTGCTTCGCGAGGGAT
atctcac putative branch site (score: 7)
tttct putative PPT
aaatttcta TA-rich tract