Skip to another splice site:
1  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtaccgggctggagggtgatcacattgtttgggcgacccaaggcaatgctgccaaccctaagcaagacggtgactttcaatgaagaaggtttctccttgatcgatagtattgattcttcttctttgtcctcgcagGTTATTCCGGAATGGCTCAAGCTCCATGGCCAGCAGGATGATGCGGAATGTGCGGAGTCGGCTAATCTGTTTGCCGAAGCAGCCACTGACATCGACGGAG

Basic information

species Selaginella moellendorffii
transcript EFJ23374
intron # 1
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tgaagaaggtttctccttgatcgatagtattgattcttcttctttgtcctcgcagGTTATTCCGGAATGGCTCAAGCTCCATGGCCAGCAGGATGATGCGGAATGTGCGGAGTCGGCTAATCTGTTTGCCGAAGCAGCCACTGACATCGACGGAG
                           tattgat  putative branch site (score: 3)
                             ttgattcttcttcttt  CT-rich tract
                       atagtatt  TA-rich tract