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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtaaaagcttctttctctctcgatttcctgttctctatccagtttgatccatcgctggtgttttcttttctttttctttctcttgtgtagTGCCCGAATGGTCACACTTTGTGTTCTACGTGCAAAGTCCGCGTCCACAACCGCTGCCCGACTTGCCGATACGAGCTCGGGAACATCCGGTGCTTGGCTC

Basic information

species Selaginella moellendorffii
transcript EFJ14696
intron # 1
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tatccagtttgatccatcgctggtgttttcttttctttttctttctcttgtgtagTGCCCGAATGGTCACACTTTGTGTTCTACGTGCAAAGTCCGCGTCCACAACCGCTGCCCGACTTGCCGATACGAGCTCGGGAACATCCGGTGCTTGGCTC
      gtttgat  putative branch site (score: 5)
            tccatcgctggtgttt  CT-rich tract
                         ttttcttttcttttt  TA-rich tract