1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
gtaagctagaaaagatttaaaagtttctcacgggctctatgatcaaacccagAAGCTCAAGGTTGTAGGAGTTTTCTACAAAGGAGGAGAGCATGCTGCCAAAAACCCCAAATTTATTGGGAATGTTGAGAATTGCCTGGGAATTCGGCAGT
species | Selaginella moellendorffii |
transcript | EFJ13636 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: CTTTCTCGTCCGCGGCACCTGCTAAG AAGCTCAAGGTTGTAGGAGTTTTCTACAAAGGAGGAGAGCATGCTGCCAAAEST: gi|169106400|gb|FE507425.1|FE507425
genomic: CTTTCTCGTCCGCGGCACCTGCTAAGgtaagctaga ... tcaaacccagAAGCTCAAGGTTGTAGGAGTTTTCTACAAAGGAGGAGAGCATGCTGCCAAA
EST: TAGGGTTGCAAGTGGCCTCCAGATCTTTCTCGTCCGCGGCACCTGCTAAG AAGCTCAAGGTTGTAGGAGTTTTCTACAAAGGAGGAGAGCATGCTGCCAAAEST: gi|169067793|gb|FE473377.1|FE473377
genomic: TAGGGTTGCAAGTGGCCTCCAGATCTTTCTCGTCCGCGGCACCTGCTAAGgtaagctaga ... tcaaacccagAAGCTCAAGGTTGTAGGAGTTTTCTACAAAGGAGGAGAGCATGCTGCCAAA
EST: CTTTCTCGTCCGCGGCACCTGCTAAG AAGCTCAAGGTTGTAGGAGTTTTCTACAAAGGAGGAGAGCATGCTGCCAAAEST: gi|169048962|gb|FE454948.1|FE454948
genomic: CTTTCTCGTCCGCGGCACCTGCTAAGgtaagctaga ... tcaaacccagAAGCTCAAGGTTGTAGGAGTTTTCTACAAAGGAGGAGAGCATGCTGCCAAA
EST: TAGGGTTGCAAGTGGCCTCCAGATCTTTCTCGTCCGCGGCACCTGCTAAG AAGCTCAAGGTTGTAGGAGTTTTCTACAAAGGAGGAGAGCATGCTGCCAAAEST: gi|70670001|gb|DN838578.1|DN838578
genomic: TAGGGTTGCAAGTGGCCTCCAGATCTTTCTCGTCCGCGGCACCTGCTAAGgtaagctaga ... tcaaacccagAAGCTCAAGGTTGTAGGAGTTTTCTACAAAGGAGGAGAGCATGCTGCCAAA
EST: TAGGGTTGCAAGTGGCCTCCAGATCTTTCTCGTCCGCGGCACCTGCTAAG AAGCTCAAGGTTGTAGGAGTTTTCTACAAAGGAGGAGAGCATGCTGCCAAAEST: gi|169062830|gb|FE472866.1|FE472866
genomic: TAGGGTTGCAAGTGGCCTCCAGATCTTTCTCGTCCGCGGCACCTGCTAAGgtaagctaga ... tcaaacccagAAGCTCAAGGTTGTAGGAGTTTTCTACAAAGGAGGAGAGCATGCTGCCAAA
EST: TAGGGTTGCAAGTGGCCTCCAGATCTTTCTCGTCCGCGGCACCTGCTAAG AAGCTCAAGGTTGTAGGAGTTTTCTACAAAGGAGGAGAGCATGCTGCCAAAEST: gi|169101313|gb|FE502508.1|FE502508
genomic: TAGGGTTGCAAGTGGCCTCCAGATCTTTCTCGTCCGCGGCACCTGCTAAGgtaagctaga ... tcaaacccagAAGCTCAAGGTTGTAGGAGTTTTCTACAAAGGAGGAGAGCATGCTGCCAAA
EST: GTGGCCTCCAGATCTTTCTCGTCCGCGGCACCTGCT--- AAGCTCAAGGTTGTAGGAGTTTTCTACAAAGGAGGAGAGCATGCTGCCAAAEST: gi|169104372|gb|FE503734.1|FE503734
genomic: GTGGCCTCCAGATCTTTCTCGTCCGCGGCACCTGCTAAGgtaagctaga ... tcaaacccagAAGCTCAAGGTTGTAGGAGTTTTCTACAAAGGAGGAGAGCATGCTGCCAAA
EST: TAGGGTTGCAAGTGGCCTCCAGATCTTTCTCGTCCGCGGCACCTGCTAAG AAGCTCAAGGTTGTAGGAGTTTTCTACAAAGGAGGAGAGCATGCTGCCAAAEST: gi|169060085|gb|FE468695.1|FE468695
genomic: TAGGGTTGCAAGTGGCCTCCAGATCTTTCTCGTCCGCGGCACCTGCTAAGgtaagctaga ... tcaaacccagAAGCTCAAGGTTGTAGGAGTTTTCTACAAAGGAGGAGAGCATGCTGCCAAA
EST: TAGGGTTGCAAGTGGCCTCCAGATCTTTCTCGTCCGCGGCACCTGCTAAG AAGCTCAAGGTTGTAGGAGTTTTCTACAAAGGAGGAGAGCATGCTGCCAAAEST: gi|169078349|gb|FE490382.1|FE490382
genomic: TAGGGTTGCAAGTGGCCTCCAGATCTTTCTCGTCCGCGGCACCTGCTAAGgtaagctaga ... tcaaacccagAAGCTCAAGGTTGTAGGAGTTTTCTACAAAGGAGGAGAGCATGCTGCCAAA
EST: TAGGGTTGCAAGTGGCCTCCAGATCTTTCTCGTCCGCGGCACCTGCTAAG AAGCTCAAGGTTGTAGGAGTTTTCTACAAAGGAGGAGAGCATGCTGCCAAAEST: gi|169088325|gb|FE492043.1|FE492043
genomic: TAGGGTTGCAAGTGGCCTCCAGATCTTTCTCGTCCGCGGCACCTGCTAAGgtaagctaga ... tcaaacccagAAGCTCAAGGTTGTAGGAGTTTTCTACAAAGGAGGAGAGCATGCTGCCAAA
EST: TAGGGTTGCAAGTGGCCTCCAGATCTTTCTCGTCCGCGGCACCTGCTAAG AAGCTCAAGGTTGTAGGAGTTTTCTACAAAGGAGGAGAGCATGCTGCCAAA
genomic: TAGGGTTGCAAGTGGCCTCCAGATCTTTCTCGTCCGCGGCACCTGCTAAGgtaagctaga ... tcaaacccagAAGCTCAAGGTTGTAGGAGTTTTCTACAAAGGAGGAGAGCATGCTGCCAAA
gtaagctagaaaagatttaaaagtttctcacgggctctatgatcaaacccagAAGCTCAAGGTTGTAGGAGTTTTCTACAAAGGAGGAGAGCATGCTGCCAAAAACCCCAAATTTATTGGGAATGTTGAGAATTGCCTGGGAATTCGGCAGT
ttctcac putative branch site (score: 16)
aaaagatttaaaagtt TA-rich tract