1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
gtactcgagttttgctttgctttgtggtttgctgaatgttcttccagACCAAGACGAAGCTGTATCTCATTCTGGATTTCATAAATGGCGGCCATCTTTTCTTCCAGCTCTATCGCCAGGGGACTTTCAG
species | Selaginella moellendorffii |
transcript | EFJ13401 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: TGACCAAGATCGTGCACCCTTTCATCGTTCAGCTGCGATGCTCCTTCCAG ACCAAGACGAAGCTGTATCTCATTCTGGATTTCATAAATGGCGGCCATCTTEST: gi|169076822|gb|FE485865.1|FE485865
genomic: TGACCAAGATCGTGCACCCTTTCATCGTTCAGCTGCGATGCTCCTTCCAGgtactcgagt ... gttcttccagACCAAGACGAAGCTGTATCTCATTCTGGATTTCATAAATGGCGGCCATCTT
EST: TGACCAAGATCGTGCACCCTTTCATCGTTCAGCTGCGATGCTCCTTCCAG ACCAAGACGAAGCTGTATCTCATTCTGGATTTCATAAATGGCGGCCATCTTEST: gi|169083109|gb|FE496405.1|FE496405
genomic: TGACCAAGATCGTGCACCCTTTCATCGTTCAGCTGCGATGCTCCTTCCAGgtactcgagt ... gttcttccagACCAAGACGAAGCTGTATCTCATTCTGGATTTCATAAATGGCGGCCATCTT
EST: TGACCAAGATCGTGCACCCTTTCATCGTTCAGCTGCGATGCTCCTTCCAG ACCAAGACGAAGCTGTATCTCATTCTGGATTTCATAAATGGCGGCCATCCTEST: gi|169080058|gb|FE487918.1|FE487918
genomic: TGACCAAGATCGTGCACCCTTTCATCGTTCAGCTGCGATGCTCCTTCCAGgtactcgagt ... gttcttccagACCAAGACGAAGCTGTATCTCATTCTGGATTTCATAAATGGCGGCCATCTT
EST: TGACCAAGATCGTGCACCCTTTCATCGTTCAGCTGCGATGCTCCTTCCAG ACCAAGACGAAGCTGTATCTCATTCTGGATTTCATAAATGGCGGCCATCTTEST: gi|169046364|gb|FE456965.1|FE456965
genomic: TGACCAAGATCGTGCACCCTTTCATCGTTCAGCTGCGATGCTCCTTCCAGgtactcgagt ... gttcttccagACCAAGACGAAGCTGTATCTCATTCTGGATTTCATAAATGGCGGCCATCTT
EST: TGACCAAGATCGTGCACCCTTTCATCGTTCAGCTGCGATGCTCCTTCCAG ACCAAGACGAAGCTGTATCTCATTCTGGATTTCATAAATGGCGGCCATCTT
genomic: TGACCAAGATCGTGCACCCTTTCATCGTTCAGCTGCGATGCTCCTTCCAGgtactcgagt ... gttcttccagACCAAGACGAAGCTGTATCTCATTCTGGATTTCATAAATGGCGGCCATCTT
gtactcgagttttgctttgctttgtggtttgctgaatgttcttccagACCAAGACGAAGCTGTATCTCATTCTGGATTTCATAAATGGCGGCCATCTTTTCTTCCAGCTCTATCGCCAGGGGACTTTCAG
tgttcttcc CT-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtactcgagttttgctttgctttgtggtttgctgaatgttcttccagACCAAGACGAAGCTGTATCTCATTCTGGATTTCATAAATGGCGGCCATCTTTTCTTCCAGCTCTATCGCCAGGGGACTTTCAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGCTC