Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   		7  
 5'  3'   		8  
 5'  3'   		9  
 5'  3'   		10  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtgtgtgggaagcaaatacgcgggaatgaacttctcgtcaactgccatcttggtttggattttgctctgttttgattcgatggtttctcttgtccagATACTTGCCTGCAAAGTGGGAAGAAAAAGAAGAACAGTGTCCAGCATACACTCTTTCACTTCAACTTGTCGAAAAAGATAGAGTACGAGGAAAGCGGAAA

Basic information

species Selaginella moellendorffii
transcript EFJ07612
intron # 1
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tgccatcttggtttggattttgctctgttttgattcgatggtttctcttgtccagATACTTGCCTGCAAAGTGGGAAGAAAAAGAAGAACAGTGTCCAGCATACACTCTTTCACTTCAACTTGTCGAAAAAGATAGAGTACGAGGAAAGCGGAAA
                           ttttgat  putative branch site (score: 4)
                                         tttctcttgtcc  putative PPT
                           ttttgatt  TA-rich tract