1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
gtaagaccagtttcgtgtctcttctttcttaaattaatatttctacccatgctatgccaaccaatcatcgtgtgcttctacatcagagatcattggcttgagaattgcaacgaactcaagtggaattcactgttctttaagatgtaagaaatgttctcaagatgattctaattttctcggtcggaatctcaacagGTTGGTTCCGCTGACCATCATATACACTACTTTGATTTGCGTAATGCGAGAATTCCTCTTTACGTATTTAAGGGACACCGGAAGGCTGTATCTTATGTGA
species | Physcomitrella patens |
transcript | PP1S81_234V6.1 |
intron # | 9 |
splice site | 3' |
intron type | U2 |
EST: CCAACATCTGCTGTGTAAAGTACAACCCTGGTTCCAGTAACCACATTGCG GTTGGTTCCGCTGACCATCATATACACTACTTTGATTTGCGTAATGCGAGAEST: gi|67695047|gb|BJ955280.1|BJ955280
genomic: CCAACATCTGCTGTGTAAAGTACAACCCTGGTTCCAGTAACCACATTGCGgtaagaccag ... atctcaacagGTTGGTTCCGCTGACCATCATATACACTACTTTGATTTGCGTAATGCGAGA
EST: TGCTGTGTAAAAGTACAACCCTGGTTCCAGTAACCACATTGCG GTTGGTTCCGCTGACCATCATATACACTACTTTGATTTGCGTAATGCGAGAEST: gi|162157819|gb|FC334090.1|FC334090
genomic: TGCTGTGT-AAAGTACAACCCTGGTTCCAGTAACCACATTGCGgtaagaccag ... atctcaacagGTTGGTTCCGCTGACCATCATATACACTACTTTGATTTGCGTAATGCGAGA
EST: CCAACATCTGCTGTGTAAAGTACAACCCTGGTTCCAGTAACCACATTGCG GTTGGTTCCGCTGACCATCATATACACTACTTTGATTTGCGTAATGCGAGAEST: gi|162189554|gb|FC365776.1|FC365776
genomic: CCAACATCTGCTGTGTAAAGTACAACCCTGGTTCCAGTAACCACATTGCGgtaagaccag ... atctcaacagGTTGGTTCCGCTGACCATCATATACACTACTTTGATTTGCGTAATGCGAGA
EST: CCAACATCTGCTGTGTAAAGTACAACCCTGGTTCCAGTAACCACATTGCG GTTGGTTCCGCTGACCATCATATACACTACTTTGATTTGCGTAATGCGAGAEST: gi|162189555|gb|FC365777.1|FC365777
genomic: CCAACATCTGCTGTGTAAAGTACAACCCTGGTTCCAGTAACCACATTGCGgtaagaccag ... atctcaacagGTTGGTTCCGCTGACCATCATATACACTACTTTGATTTGCGTAATGCGAGA
EST: CCAACATCTGCTGTGTAAAGTACAACCCTGGTTCCAGTAACCACATTGCG GTTGGTTCCGCTGACCATCATATACACTACTTTGATTTGCGTAATGCGAGAEST: gi|67571682|gb|BJ944506.1|BJ944506
genomic: CCAACATCTGCTGTGTAAAGTACAACCCTGGTTCCAGTAACCACATTGCGgtaagaccag ... atctcaacagGTTGGTTCCGCTGACCATCATATACACTACTTTGATTTGCGTAATGCGAGA
EST: CCAACATCTGCTGTGTAAAGTACAACCCTGGTTCCAGTAACCACATTGCG GTTGGTTCCGCTGACCATCATATACACTACTTTGATTTGCGTAATGCGAGA
genomic: CCAACATCTGCTGTGTAAAGTACAACCCTGGTTCCAGTAACCACATTGCGgtaagaccag ... atctcaacagGTTGGTTCCGCTGACCATCATATACACTACTTTGATTTGCGTAATGCGAGA
gatgtaagaaatgttctcaagatgattctaattttctcggtcggaatctcaacagGTTGGTTCCGCTGACCATCATATACACTACTTTGATTTGCGTAATGCGAGAATTCCTCTTTACGTATTTAAGGGACACCGGAAGGCTGTATCTTATGTGA
ttctaat putative branch site (score: 26)
atgattctaatttt TA-rich tract