1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
...tcaatcagtcgctcagaatcctggcacttttgtctcattgtcttgctcgttcactcattacctcttgatatatttaagatctattgtttatcctgtgcagAGCCTATGCTGACAGAAGGGAGCATAAGGGACGTGATGTGGAACGACAACTGGACGTGTGTGACAGAAGACGGTGGTTTATCAGCACAATTTGAACACAG
species | Physcomitrella patens |
transcript | PP1S392_8V6.2 |
intron # | 9 |
splice site | 3' |
intron type | U2 |
EST: GTAATAATCAACCTGGACAGATGGTAGTTGGACAGACATTCACTATTG AGCCTATGCTGACAGAAGGGAGCATAAGGGACGTGATGTGGAACGACAACTEST: gi|37832662|gb|BJ590674.1|BJ590674
genomic: GTAATAATCAACCTGGACAGATGGTAGTTGGACAGACATTCACTATTGgtatgtttct ... tcctgtgcagAGCCTATGCTGACAGAAGGGAGCATAAGGGACGTGATGTGGAACGACAACT
EST: GTAATAATCAACCTGGACAGATGGTAGTTGGACAGACATTCACTATTG AGCCTATGCTGACAGAAGGGAGCATAAGGGACGTGATGTGGAACGACAACTEST: gi|208359529|gb|DC954082.1|DC954082
genomic: GTAATAATCAACCTGGACAGATGGTAGTTGGACAGACATTCACTATTGgtatgtttct ... tcctgtgcagAGCCTATGCTGACAGAAGGGAGCATAAGGGACGTGATGTGGAACGACAACT
EST: GTAATAATCAACCTGGACAGATGGTAGTTGGACAGACATTCACTATTG AGCCTATGCTGACAGAAGGGAGCATAAGGGACGTGATGTGGAACGACAACTEST: gi|37832597|gb|BJ590609.1|BJ590609
genomic: GTAATAATCAACCTGGACAGATGGTAGTTGGACAGACATTCACTATTGgtatgtttct ... tcctgtgcagAGCCTATGCTGACAGAAGGGAGCATAAGGGACGTGATGTGGAACGACAACT
EST: GTAATAATCAACCTGGACAGATGGTAGTTGGACAGACATTCACTATTG AGCCTATGCTGACAGAAGGGAGCATAAGGGACGTGATGTGGAACGGCAACTEST: gi|162238238|gb|FC418744.1|FC418744
genomic: GTAATAATCAACCTGGACAGATGGTAGTTGGACAGACATTCACTATTGgtatgtttct ... tcctgtgcagAGCCTATGCTGACAGAAGGGAGCATAAGGGACGTGATGTGGAACGACAACT
EST: GTAATAATCAACCTGGACAGATGGTAGTTGGACAGACATTCACTATTG AGCCTATGCTGACAGAAGGGAGCATAAGGGACGTGATGTGGAACGACAACT
genomic: GTAATAATCAACCTGGACAGATGGTAGTTGGACAGACATTCACTATTGgtatgtttct ... tcctgtgcagAGCCTATGCTGACAGAAGGGAGCATAAGGGACGTGATGTGGAACGACAACT
ctcgttcactcattacctcttgatatatttaagatctattgtttatcctgtgcagAGCCTATGCTGACAGAAGGGAGCATAAGGGACGTGATGTGGAACGACAACTGGACGTGTGTGACAGAAGACGGTGGTTTATCAGCACAATTTGAACACAG
tcttgat putative branch site (score: 6)
tttatcct putative PPT
ttgatatatttaagat TA-rich tract