1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
...caaggtgtgaagtagtatgaaggaaatactgtggacgtgaaatatggcgatggtgagtcgggaatgattgacatgatgaatgggtgggtactgtttgcagCTGGAAGCGTGTGTGCACCCGTTCTTTGATGAGCTAAGGGATCCTAACTGCCGGCTTCCGAATGGGCGGCCACTGCCCTCTCTGTTCAACTTCAAAACCC
species | Physcomitrella patens |
transcript | PP1S306_62V6.1 |
intron # | 9 |
splice site | 3' |
intron type | U2 |
EST: ACTTGGTGTCAAGGCTCCTTCAGTACTCTCCAAATCTGCGGTGCAACGCT CTGGAAGCGTGTGTGCACCCGTTCTTTGATGAGCTAAGGGATCCTAACTGC
genomic: ACTTGGTGTCAAGGCTCCTTCAGTACTCTCCAAATCTGCGGTGCAACGCTgtgagtagcg ... ctgtttgcagCTGGAAGCGTGTGTGCACCCGTTCTTTGATGAGCTAAGGGATCCTAACTGC
ggcgatggtgagtcgggaatgattgacatgatgaatgggtgggtactgtttgcagCTGGAAGCGTGTGTGCACCCGTTCTTTGATGAGCTAAGGGATCCTAACTGCCGGCTTCCGAATGGGCGGCCACTGCCCTCTCTGTTCAACTTCAAAACCC
gattgac putative branch site (score: 40)
aatgatt TA-rich tract