1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' |
gtgagatttcgaagatcatcaagaaagttcttcatggtcgcagaagtgatacctacgccattgtaaggaagttttgctttgtgtaagttaattctaaatacttagtcgttgtggaaattgtgcagATGTATCTGTGACTGTAGTAGTCATCTTTTTGATGATGTCGGTGGCAGTTGCCCCTACTGTGGGCTACAA
species | Physcomitrella patens |
transcript | PP1S269_30V6.2 |
intron # | 9 |
splice site | 3' |
intron type | U2 |
EST: AAGTATTAAGAATGCCGTTCCATTTCTGGGGATGATTCCATTCATTCCAG ATGTGTCTGTGACTGTAGTAGTCATCTTTTTGATGATGTCGGTGGCAGTTGEST: gi|208381414|gb|DC927850.1|DC927850
genomic: AAGTATTAAGAATGCCGTTCCATTTCTGGGGATGATTCCATTCATTCCAGgtgagatttc ... aattgtgcagATGTATCTGTGACTGTAGTAGTCATCTTTTTGATGATGTCGGTGGCAGTTG
EST: AAGTATTAAGAATGCCGTTCCATTTCTGGGGATGATTCCATTCATTCCAG ATGTGTCTGTGACTGTAGTAGTCATCTTTTTGATGATGTCGGTGGCAGTTGEST: gi|208344725|gb|DC905174.1|DC905174
genomic: AAGTATTAAGAATGCCGTTCCATTTCTGGGGATGATTCCATTCATTCCAGgtgagatttc ... aattgtgcagATGTATCTGTGACTGTAGTAGTCATCTTTTTGATGATGTCGGTGGCAGTTG
EST: AAGTATTAAGAATGCCGTTCCATTTCTGGGGATGATTCCATTCATTCCAG ATGTATCTGTGACTGTAGTAGTCATCTTTTTGATGATGTCGGTGGCAGTTGEST: gi|208356794|gb|DC926805.1|DC926805
genomic: AAGTATTAAGAATGCCGTTCCATTTCTGGGGATGATTCCATTCATTCCAGgtgagatttc ... aattgtgcagATGTATCTGTGACTGTAGTAGTCATCTTTTTGATGATGTCGGTGGCAGTTG
EST: AGTATTAAGAATGCCGTTCCATTTCTGGGGATGATTCCATTCATTCCCAG ATGTATCTGTGACTGTAGTAGTCATCTTTTTGATGATGTCGGTGGCAGTTEST: gi|208363842|gb|DC943299.1|DC943299
genomic: AGTATTAAGAATGCCGTTCCATTTCTGGGGATGATTCCATTCATT-CCAGgtgagatttc ... aattgtgcagATGTATCTGTGACTGTAGTAGTCATCTTTTTGATGATGTCGGTGGCAGTT
EST: AAGTATTAAGAATGCCGTTCCATTTCTGGGGATGATTCCATTCATTCCAG ATGTATCTGTGACTGTAGTAGTCATCTTTTTGATGATGTCGGTGGCAGTTGEST: gi|100395052|gb|BY953582.1|BY953582
genomic: AAGTATTAAGAATGCCGTTCCATTTCTGGGGATGATTCCATTCATTCCAGgtgagatttc ... aattgtgcagATGTATCTGTGACTGTAGTAGTCATCTTTTTGATGATGTCGGTGGCAGTTG
EST: AAGTATTAAGAATGCCGTTCCATTTCTGGGGATGATTCCATTCATTCCAG ATGTATCTGTGACTGTAGTAGTCATCTTTTTGATGATGTCGGTGGCAGTTG
genomic: AAGTATTAAGAATGCCGTTCCATTTCTGGGGATGATTCCATTCATTCCAGgtgagatttc ... aattgtgcagATGTATCTGTGACTGTAGTAGTCATCTTTTTGATGATGTCGGTGGCAGTTG
gttttgctttgtgtaagttaattctaaatacttagtcgttgtggaaattgtgcagATGTATCTGTGACTGTAGTAGTCATCTTTTTGATGATGTCGGTGGCAGTTGCCCCTACTGTGGGCTACAA
ttctaaa putative branch site (score: 3)
taagttaattctaaat TA-rich tract