1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
...aaatttgcgtaaaagaagggtaaattgcatgtcgtgcatcagacgtagaacttgtacttgaggaagttgttcaacagtaccttctaactttgttgtgcagATGACAATTGACGAATTAAAAAGTGAGTTGTACAAGATTTTGGATTGGATGGTTCCAGTTGCTTCCAACACGACGAA
species | Physcomitrella patens |
transcript | PP1S126_154V6.1 |
intron # | 9 |
splice site | 3' |
intron type | U2 |
EST: TGAAAGCTGCATTGAGAATTCGCTTACAGCAAAATTCCAATTTGGATCAA ATGACAATTGACGAATTAAAAAGTGAGTTGTACAAGATTTTGGATTGGATG
genomic: TGAAAGCTGCATTGAGAATTCGCTTACAGCAAAATTCCAATTTGGATCAAgtgagtttca ... tgttgtgcagATGACAATTGACGAATTAAAAAGTGAGTTGTACAAGATTTTGGATTGGATG
tagaacttgtacttgaggaagttgttcaacagtaccttctaactttgttgtgcagATGACAATTGACGAATTAAAAAGTGAGTTGTACAAGATTTTGGATTGGATGGTTCCAGTTGCTTCCAACACGACGAA
ttctaac putative branch site (score: 2)
ctttgtt CT-rich tract
taacttt TA-rich tract