1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
...tatttggaagttcattactttttcatgcggttgtgaagcgagttctctgttctggtcattaccctacttctaaacgatagcatttttcgctgttgcacagAGTGTTAGAGCATCTTCTTTTGCGAGATACGTACACCCAAGAATCTATTCCTGCTCTGCACAAAATCAG
species | Physcomitrella patens |
transcript | PP1S105_58V6.1 |
intron # | 9 |
splice site | 3' |
intron type | U2 |
EST: CGGAAGCAATGGCTGTGCAAACGGTGCCAAACAATGAACGCAAAACTTAG GGTGTTAGAGCATCTTCTTTTGCGAGATACGTACACCCAAGAATCTATTCCEST: gi|37828233|gb|BJ586245.1|BJ586245
genomic: CGGAAGCAATGGCTGTGCAAACGGTGCCAAACAATGAACGCAAAACTTAGgtaagtagct ... tgttgcacagAGTGTTAGAGCATCTTCTTTTGCGAGATACGTACACCCAAGAATCTATTCC
EST: CGGAAGCAATGGCTGTGCAAACGGTGCCAAACAATGGACGCAAAACTTAG AGTGTTAGAGCATCTTCTTTTGCGAGATACGTACACCCAAGAATCTATTCC
genomic: CGGAAGCAATGGCTGTGCAAACGGTGCCAAACAATGAACGCAAAACTTAGgtaagtagct ... tgttgcacagAGTGTTAGAGCATCTTCTTTTGCGAGATACGTACACCCAAGAATCTATTCC
tctgttctggtcattaccctacttctaaacgatagcatttttcgctgttgcacagAGTGTTAGAGCATCTTCTTTTGCGAGATACGTACACCCAAGAATCTATTCCTGCTCTGCACAAAATCAG
ttctaaa putative branch site (score: 5)
tttttcgct putative PPT
attttt TA-rich tract