1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
...agattttttacagaagttacgcgatcttcaagttcagagctgatttttgttttttaatttttgttttttttttgttttttttgttttttttttgcattagGGTCGAGGACTGAGAAACTCTTCGTACGTACAATCACTGCGAGGTGATCCTTTCAAG
species | Physcomitrella patens |
transcript | PP1S100_85V6.1 |
intron # | 9 |
splice site | 3' |
intron type | U2 |
EST: GTGTTTGTTGTGCTCAAACGGGCCGGCGGCTTCGAGATTTAGCAGTGGAG GGTCGAGGACTGAGAAACTCTTCGTACGTACAATCACTGCGAGGTGATCCTEST: gi|162193001|gb|FC371464.1|FC371464
genomic: GTGTTTGTTGTGCTCAAACGGGCCGGCGGCTTCGAGATTTAGCAGTGGAGgtgatagtgt ... tttgcattagGGTCGAGGACTGAGAAACTCTTCGTACGTACAATCACTGCGAGGTGATCCT
EST: GTGTTTGTTGTGCTCAAACGGGCCGGCGGCTTCGAGATTTAGCAGTGGAG GGTCGAGGACTGAGAAACTCTTCGTACGTACAATCACTGCGAGGTGATCCTEST: gi|162152972|gb|FC329274.1|FC329274
genomic: GTGTTTGTTGTGCTCAAACGGGCCGGCGGCTTCGAGATTTAGCAGTGGAGgtgatagtgt ... tttgcattagGGTCGAGGACTGAGAAACTCTTCGTACGTACAATCACTGCGAGGTGATCCT
EST: GTGTTTGTTGTGCTCAAACGGGCCGGCGGCTTCGAGATTTAGCAGTGGAG GGTCGAGGACTGAGAAACTCTTCGTACGTACAATCACTGCGAGGTGATCCT
genomic: GTGTTTGTTGTGCTCAAACGGGCCGGCGGCTTCGAGATTTAGCAGTGGAGgtgatagtgt ... tttgcattagGGTCGAGGACTGAGAAACTCTTCGTACGTACAATCACTGCGAGGTGATCCT
tttgttttttaatttttgttttttttttgttttttttgttttttttttgcattagGGTCGAGGACTGAGAAACTCTTCGTACGTACAATCACTGCGAGGTGATCCTTTCAAG
ttttaat putative branch site (score: 3)
tttttgtttttttttt CT-rich tract
tttttaatttttgttt TA-rich tract