1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
...agaagaggctcacgtgtcaagttttctatgattgtttggtttcagttagtgacggtcttcatgggtgaagaaactaatatgtgaaagtttgtttttgtagCATGGCTTGGACGCGGTACCAGGCTTCTCTTCATTTGTGGGCTTCGTAGAGTCT
species | Physcomitrella patens |
transcript | PP1S78_175V6.1 |
intron # | 8 |
splice site | 3' |
intron type | U2 |
EST: CCATGTTCTGCTGTGCTGGTTGTCTTTACAAAACTAGGATTGAAGACAAG CATGGCTTGGACGCGGTACCAGGCTTCTCTTCATTTGTGGGCTTCGTAGAGEST: gi|162276289|gb|FC452617.1|FC452617
genomic: CCATGTTCTGCTGTGCTGGTTGTCTTTACAAAACTAGGATTGAAGACAAGgtgagttcat ... gtttttgtagCATGGCTTGGACGCGGTACCAGGCTTCTCTTCATTTGTGGGCTTCGTAGAG
EST: CCATGTTCTGCTGTGCTGGTTGTCTTTACAAAACTAGGATTGAAGACAAG CATGGCTTGGACGCGGTACCAGGCTTCTCTTCATTTGTGGGCTTCGTAGAGEST: gi|162181122|gb|FC357281.1|FC357281
genomic: CCATGTTCTGCTGTGCTGGTTGTCTTTACAAAACTAGGATTGAAGACAAGgtgagttcat ... gtttttgtagCATGGCTTGGACGCGGTACCAGGCTTCTCTTCATTTGTGGGCTTCGTAGAG
EST: CCATGTTTTGCTGTGCTGGTTGTCTTTACAAAACTAGGATTGAAGACAAG CATGGCTTGGACGCGGTACCAGGCTTCTTTTCATTTGTGGGCTTCGTAGAG
genomic: CCATGTTCTGCTGTGCTGGTTGTCTTTACAAAACTAGGATTGAAGACAAGgtgagttcat ... gtttttgtagCATGGCTTGGACGCGGTACCAGGCTTCTCTTCATTTGTGGGCTTCGTAGAG
ttagtgacggtcttcatgggtgaagaaactaatatgtgaaagtttgtttttgtagCATGGCTTGGACGCGGTACCAGGCTTCTCTTCATTTGTGGGCTTCGTAGAGTCT
aactaat putative branch site (score: 7)
tttgttttt putative PPT
aaactaatat TA-rich tract