1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
gtttttgactactacttcaccatttcgctgtggaatcaagacgaatatcttcctgtgtagtcgcattgttcgtgctcaatacatgtcaagtgtcaattgtaggatcccttcatggtagttctcggtatcaagtattatgtctaactgctcttcttatgtccagACTGTGGAGGAGCTGTACAAGGTTGCCTCGATTGCTCTGAGCCCCAACGTCACTGGGCAAATAATG
species | Physcomitrella patens |
transcript | PP1S64_220V6.1 |
intron # | 8 |
splice site | 3' |
intron type | U2 |
EST: AATGTGGACAGCGTGGTGGATACTTTGAAATGACCAACTTTCACCCCAAG ACTGTGGAGGAGCTGTACAAGGTTGCCTCGATTGCTCTGAGCCCCAACGTCEST: gi|162156210|gb|FC332585.1|FC332585
genomic: AATGTGGACAGCGTGGTGGATACTTTGAAATGACCAACTTTCACCCCAAGgtttttgact ... ttatgtccagACTGTGGAGGAGCTGTACAAGGTTGCCTCGATTGCTCTGAGCCCCAACGTC
EST: AATGTGGACAGCGTGGTGGATACTTTGAAATGACCAACTTTCACCCCAAG ACTGTGGAGGAGCTGTACAAGGTTGCCTCGATTGCTCTGAGCCCCAACGTCEST: gi|162165158|gb|FC341153.1|FC341153
genomic: AATGTGGACAGCGTGGTGGATACTTTGAAATGACCAACTTTCACCCCAAGgtttttgact ... ttatgtccagACTGTGGAGGAGCTGTACAAGGTTGCCTCGATTGCTCTGAGCCCCAACGTC
EST: AATGTGGACAGCGTGGTGGATACTTTGAAATGACCAACTTTCACCCCAAG ACTGTGGAGGAGCTGTACAAGGTTGCCTCGATTGCTCTGAGCCCCAACGTCEST: gi|162170441|gb|FC347626.1|FC347626
genomic: AATGTGGACAGCGTGGTGGATACTTTGAAATGACCAACTTTCACCCCAAGgtttttgact ... ttatgtccagACTGTGGAGGAGCTGTACAAGGTTGCCTCGATTGCTCTGAGCCCCAACGTC
EST: AATGTGGACAGCGTGGTGGATACTTTGAAATGACCAACTTTCACCCCAAG ACTGTGGAGGAGCTGTACAAGGTTGCCTCGATTGCTCTGAGCCCCAACGTCEST: gi|162191349|gb|FC368145.1|FC368145
genomic: AATGTGGACAGCGTGGTGGATACTTTGAAATGACCAACTTTCACCCCAAGgtttttgact ... ttatgtccagACTGTGGAGGAGCTGTACAAGGTTGCCTCGATTGCTCTGAGCCCCAACGTC
EST: AATGTGGACAGCGTGGTGGATACTTTGAAATGACCAACTTTCACCCCAAG ACTGTGGAGGAGCTGTACAAGGTTGCCTCGATTGCTCTGAGCCCCAACGTCEST: gi|162246304|gb|FC421049.1|FC421049
genomic: AATGTGGACAGCGTGGTGGATACTTTGAAATGACCAACTTTCACCCCAAGgtttttgact ... ttatgtccagACTGTGGAGGAGCTGTACAAGGTTGCCTCGATTGCTCTGAGCCCCAACGTC
EST: AATGTGGACAGCGTGGTGGATACTTTGAAATGACCAACTTTCACCCCAAG ACTGTGGAGGAGCTGTACAAGGTTGCCTCGATTGCTCTGAGCCCCAACGTCEST: gi|162244637|gb|FC424604.1|FC424604
genomic: AATGTGGACAGCGTGGTGGATACTTTGAAATGACCAACTTTCACCCCAAGgtttttgact ... ttatgtccagACTGTGGAGGAGCTGTACAAGGTTGCCTCGATTGCTCTGAGCCCCAACGTC
EST: AATGTGGACAGCGTGGTGGATACTTTGAAATGACCAACTTTCACCCCAAG ACTGTGGAGGAGCTGTACAAGGTTGCCTCGATTGCTCTGAGCCCCAACGTCEST: gi|162188744|gb|FC364030.1|FC364030
genomic: AATGTGGACAGCGTGGTGGATACTTTGAAATGACCAACTTTCACCCCAAGgtttttgact ... ttatgtccagACTGTGGAGGAGCTGTACAAGGTTGCCTCGATTGCTCTGAGCCCCAACGTC
EST: AATGTGGACAGCGTGGTGGATACTTTGAAATGACCAACTTTCACCCCAAG ACTGTGGAGGAGCTGTACAAGGTTGCCTCGATTGCTCTGAGCCCCAACGTC
genomic: AATGTGGACAGCGTGGTGGATACTTTGAAATGACCAACTTTCACCCCAAGgtttttgact ... ttatgtccagACTGTGGAGGAGCTGTACAAGGTTGCCTCGATTGCTCTGAGCCCCAACGTC
ttcatggtagttctcggtatcaagtattatgtctaactgctcttcttatgtccagACTGTGGAGGAGCTGTACAAGGTTGCCTCGATTGCTCTGAGCCCCAACGTCACTGGGCAAATAATG
gtctaac putative branch site (score: 18)
ctcttcttatgtcc putative PPT
aagtattat TA-rich tract