1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' |
...gtcagaatcttgaattggcttcattccgtcaggtttttgaacgtgatcaccaagtgggcaggccatatttgtctgattgaactcctgatttgtgaaacagCCCCTGAACTTGAGTTCGGAAACAGGGTCTATCGGGTGCGATTTGACGAGAAATACAGTGAGAAG
species | Physcomitrella patens |
transcript | PP1S49_100V6.1 |
intron # | 8 |
splice site | 3' |
intron type | U2 |
EST: TGCCCGATGCAGATGTTNTAGTTCGCAAACTTCGTGATG CCCCTGAACTTGAGTTCGGAANCAGGNTCTATCGGGTGCGATTTGACGAGAEST: gi|208371348|gb|DC944512.1|DC944512
genomic: TGCCCGATGCAGATGTTCTAGTTCGCAAACTTCGTGATGgttgatgcct ... tgtgaaacagCCCCTGAACTTGAGTTCGGAAACAGGGTCTATCGGGTGCGATTTGACGAGA
EST: CATAGGCACCATGCCCGATGCAGATGTTTTAGTTCGCAAACTTCGTGATG CCCCTGAACNTGAGTTCGGAAACAGGGTCTATCGGGTGCGATTNGACGAGAEST: gi|100414488|gb|BY992798.1|BY992798
genomic: CATAGGCACCATGCCCGATGCAGATGTTCTAGTTCGCAAACTTCGTGATGgttgatgcct ... tgtgaaacagCCCCTGAACTTGAGTTCGGAAACAGGGTCTATCGGGTGCGATTTGACGAGA
EST: ATAGGCACCATGCCCGATGCAGATGTTCTAGTTCCGCAA-CTTCGTGATG CCCCTGAACTTGAGTTCGGAAA
genomic: ATAGGCACCATGCCCGATGCAGATGTTCTAGTTC-GCAAACTTCGTGATGgttgatgcct ... tgtgaaacagCCCCTGAACTTGAGTTCGGAAA
atcaccaagtgggcaggccatatttgtctgattgaactcctgatttgtgaaacagCCCCTGAACTTGAGTTCGGAAACAGGGTCTATCGGGTGCGATTTGACGAGAAATACAGTGAGAAG
tcctgat putative branch site (score: 2)
atatttgt TA-rich tract