1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
gtaagaggcggcacaccttattatcaatttttcagatctcttctgtttcttaacgatttggtagctggtttgtaagatacacttcagcaagataaggtgaaacttttcactggtctgacaactacatgatggcagGTGTGAGTATTTTTCTTCTCGGTATTGTTTACATGCTGTCTGGCTATGTTCTGTCCTACTTTCTGTGGTATAAGCCCCTCTACCGGGCAATGAG
species | Physcomitrella patens |
transcript | PP1S257_93V6.1 |
intron # | 8 |
splice site | 3' |
intron type | U2 |
EST: TTTGGGAACNTCATTTGCGTGACCCGCAGCGTGGATCGGGGGTGTTGGTG GTGTGAGTATTTTTCTTCTCGGTATTG-TTACATGCTGTCTGGCTATGTTCEST: gi|37847784|gb|BJ605792.1|BJ605792
genomic: TTTTGGAACTTCATTTGCGTGA-CCGCAGCGTGGATCGGGGGTGTTGGTGgtaagaggcg ... atgatggcagGTGTGAGTATTTTTCTTCTCGGTATTGTTTACATGCTGTCTGGCTATGTTC
EST: ATTTTGGAACTTCATTTGCGTGACCGCAGCGTGGATCGGGGGTGTTGGTG GTGTGAGTATTTTTCTTCTCGGTATTGTTTACATGCTGTCTGGCTATGTTC
genomic: ATTTTGGAACTTCATTTGCGTGACCGCAGCGTGGATCGGGGGTGTTGGTGgtaagaggcg ... atgatggcagGTGTGAGTATTTTTCTTCTCGGTATTGTTTACATGCTGTCTGGCTATGTTC
acttcagcaagataaggtgaaacttttcactggtctgacaactacatgatggcagGTGTGAGTATTTTTCTTCTCGGTATTGTTTACATGCTGTCTGGCTATGTTCTGTCCTACTTTCTGTGGTATAAGCCCCTCTACCGGGCAATGAG
gtctgac putative branch site (score: 19)
aaactttt TA-rich tract