1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' |
gtactacctcctactacattctggtcaaatgtagtttgttataaatatgtttagtgatgttgctatcaattgttagcgatgtcttaccgagttccattttacttaaaaagaaagctaacagacccttatgtgcagCTGCGGCGCCGGTGGAAAGAAGGGGTCCCAATATCTCTTTTGCCAGTTGACGAAAGTCCTGATCTGCGCTACTGCCTGCTTCACCAGCAATTGCAGTTAA
species | Physcomitrella patens |
transcript | PP1S137_262V6.1 |
intron # | 8 |
splice site | 3' |
intron type | U2 |
EST: TCAAAACTGAGCAAGGCTTGGGGGAGTTTTGGCTAGAAGTAATAAAAGAG CTGCGGCGCCGGTGGAAAGAAGGGGTCCCAATATCTCTTTTGCCAGTTGAC
genomic: TCAAAACTGAGCAAGGCATGGGGGAGTTTTGGCTAGAAGTAATAAAAGAGgtactacctc ... ttatgtgcagCTGCGGCGCCGGTGGAAAGAAGGGGTCCCAATATCTCTTTTGCCAGTTGAC
gtcttaccgagttccattttacttaaaaagaaagctaacagacccttatgtgcagCTGCGGCGCCGGTGGAAAGAAGGGGTCCCAATATCTCTTTTGCCAGTTGACGAAAGTCCTGATCTGCGCTACTGCCTGCTTCACCAGCAATTGCAGTTAA
agctaac putative branch site (score: 5)
cccttat putative PPT
attttacttaaaaaga TA-rich tract