1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
gtgcgtattagctcttctttgagtgttgttaatttccttgcatcacgtgtggtccagaaactcaaataaatatctgggtgtgcttgaacaaagttgaggaaatgtgctttaacaaagttgaatgtaagtgtgccgaaatggtgccttcactaacacatggaggtggggtcctgcagTTCCATGCCGCTTGCATCGACCAGTGGTTGAAGCAACAAGCCACTTGCCCCGTGTGTAAATTTAGGATACGTGAACCTGAAACTCCCACGGCGACTGCAC
species | Physcomitrella patens |
transcript | PP1S124_89V6.1 |
intron # | 8 |
splice site | 3' |
intron type | U2 |
EST: AGCAAGTGGTGGATGGGGAAATAATTCGAACACTTCCATGTGTACACCAA TTCCATGCCGCTTGCATCGACCAGTGGTTGAAGCAACAAGCCACTTGCCCCEST: gi|162248756|gb|FC421996.1|FC421996
genomic: AGCAAGTGGTGGATGGGGAAATAATTCGAACACTTCCATGTGTACACCAAgtgcgtatta ... ggtcctgcagTTCCATGCCGCTTGCATCGACCAGTGGTTGAAGCAACAAGCCACTTGCCCC
EST: AGCAAGTGGTGGATGGGGAAATAATTCGAACACTTCCATGTGTACACCAA TTCCATGCCGCTTGCATCGACCAGTGGTTGAAGCAACAAGCCACTTGCCCCEST: gi|162234958|gb|FC411745.1|FC411745
genomic: AGCAAGTGGTGGATGGGGAAATAATTCGAACACTTCCATGTGTACACCAAgtgcgtatta ... ggtcctgcagTTCCATGCCGCTTGCATCGACCAGTGGTTGAAGCAACAAGCCACTTGCCCC
EST: AGCAAGTGGTGGATGGGGAAATAATTCGAACACTTCCATGTGTACACCAA TTCCATGCCGCTTGCATCGACCAGTGGTTGAAGCAACAAGCCACTTGCCCC
genomic: AGCAAGTGGTGGATGGGGAAATAATTCGAACACTTCCATGTGTACACCAAgtgcgtatta ... ggtcctgcagTTCCATGCCGCTTGCATCGACCAGTGGTTGAAGCAACAAGCCACTTGCCCC
atgtaagtgtgccgaaatggtgccttcactaacacatggaggtggggtcctgcagTTCCATGCCGCTTGCATCGACCAGTGGTTGAAGCAACAAGCCACTTGCCCCGTGTGTAAATTTAGGATACGTGAACCTGAAACTCCCACGGCGACTGCAC
cactaac putative branch site (score: 12)