1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
gtacaactagacagcagtgatgctagtgggttgtgtatttcgagccttccatttaattgtcaacttcattttggatcatcttctccattttcttgctctatttgaatttcggaattgaagagcacaagaatctctccacggagaagagggctgatttatgtttgtctgttcccagAGAATCAACATTCAAGAAATCAAGAATCACGAATGGTTTTTGAAAAATTTACCAACGGATCTGGTCGACCTTGCTGACAGGAGTTACGGTTTTGAGGACC
species | Physcomitrella patens |
transcript | PP1S116_98V6.1 |
intron # | 8 |
splice site | 3' |
intron type | U2 |
EST: CGGAGTGCAAGCATTTGCTCTCTAGGATTTTCGTTTCTAACCCAGCCAAG AGAATCAACATTCAAGAAATCAAGAATCACGAATGGTTTTTGAAAAATTTAEST: gi|162273827|gb|FC449758.1|FC449758
genomic: CGGAGTGCAAGCATTTGCTCTCTAGGATTTTCGTTTCTAACCCAGCCAAGgtacaactag ... ctgttcccagAGAATCAACATTCAAGAAATCAAGAATCACGAATGGTTTTTGAAAAATTTA
EST: CGGAGTGCAAGCATTTGCTCTCTAGGATTTTCGTTTCTAACCCAGCCAAG AGAATCAACATTCAAGAAATCAAGAATCACGAATGGTTTTTGAAAAATTTAEST: gi|162256473|gb|FC432504.1|FC432504
genomic: CGGAGTGCAAGCATTTGCTCTCTAGGATTTTCGTTTCTAACCCAGCCAAGgtacaactag ... ctgttcccagAGAATCAACATTCAAGAAATCAAGAATCACGAATGGTTTTTGAAAAATTTA
EST: AACCCAGCCAAG AGAATCAACATTCAAGAAATCAAGAATCACGAATGGTTTTTGAAAAATTTAEST: gi|162156539|gb|FC332147.1|FC332147
genomic: AACCCAGCCAAGgtacaactag ... ctgttcccagAGAATCAACATTCAAGAAATCAAGAATCACGAATGGTTTTTGAAAAATTTA
EST: CGGAGTGCAAGCATTTGCTCTCTAGGATTTTCGTTTCTAACCCAGCCAAG AGAATCAACATTCAAGAAATCAAGAATCACGAATGGTTTTTGAAAAATTTAEST: gi|162231404|gb|FC406827.1|FC406827
genomic: CGGAGTGCAAGCATTTGCTCTCTAGGATTTTCGTTTCTAACCCAGCCAAGgtacaactag ... ctgttcccagAGAATCAACATTCAAGAAATCAAGAATCACGAATGGTTTTTGAAAAATTTA
EST: CGGAGTGCAAGCATTTGCTCTCTAGGATTTTCGTTTCTAACCCAGCCAAG AGAATCAACATTCAAGAAATCAAGAATCACGAATGGTTTTTGAAAAATTTA
genomic: CGGAGTGCAAGCATTTGCTCTCTAGGATTTTCGTTTCTAACCCAGCCAAGgtacaactag ... ctgttcccagAGAATCAACATTCAAGAAATCAAGAATCACGAATGGTTTTTGAAAAATTTA
agcacaagaatctctccacggagaagagggctgatttatgtttgtctgttcccagAGAATCAACATTCAAGAAATCAAGAATCACGAATGGTTTTTGAAAAATTTACCAACGGATCTGGTCGACCTTGCTGACAGGAGTTACGGTTTTGAGGACC
ggctgat putative branch site (score: 6)
tctgttccc putative PPT
atttatgttt TA-rich tract