1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
gtaggtccttcgtctccggcgaactttctggttatcagtgcattttggactatgcgacttagtgattgtttgcaacacgtatgagggattgtgaaaagattgaattataagtgtcacaagtgataaattgtagcattctataaaatgtctgggctaaaagttgtgagtgacaaagttttctgttgactgcagGGTGGTGTGGACGTTTGGGAGGTACATATCGTCTATACTGCACGATGGGCCACATTTTTCTTAATCTGGG
species | Physcomitrella patens |
transcript | PP1S100_63V6.1 |
intron # | 8 |
splice site | 3' |
intron type | U2 |
EST: CTCTGTNTCAGTCGGATTGTCTAGTGCTAGCTACACCTAGTGAACCACAG GGTGGTGTGGACGTTTGGGAGGTACATATCGTCTATACTGCACGATGGGCCEST: gi|208400537|gb|DC925287.1|DC925287
genomic: CTCTGTTTCAGTCGGATTGTCTAGTGCTAGCTACACCTAGTGAACCACAGgtaggtcctt ... ttgactgcagGGTGGTGTGGACGTTTGGGAGGTACATATCGTCTATACTGCACGATGGGCC
EST: CTCTGTTTCAGTCGGATTGTCTAGTGCTAGCTACACCTAGTGAACCACAG GGTGGTGTGGACGTTTGGGAGGTACATATCGTTTATACTGCACGATGGGCCEST: gi|208362071|gb|DC950506.1|DC950506
genomic: CTCTGTTTCAGTCGGATTGTCTAGTGCTAGCTACACCTAGTGAACCACAGgtaggtcctt ... ttgactgcagGGTGGTGTGGACGTTTGGGAGGTACATATCGTCTATACTGCACGATGGGCC
EST: CTCTGTTTCAGTCGGATTGTCTAGTGCTAGCTACACCTAGTGAACCACAG GGTGGTGTGGACGTTTGGGAGGTACATATCGTCTATACTGCACGATGGGCC
genomic: CTCTGTTTCAGTCGGATTGTCTAGTGCTAGCTACACCTAGTGAACCACAGgtaggtcctt ... ttgactgcagGGTGGTGTGGACGTTTGGGAGGTACATATCGTCTATACTGCACGATGGGCC
ctataaaatgtctgggctaaaagttgtgagtgacaaagttttctgttgactgcagGGTGGTGTGGACGTTTGGGAGGTACATATCGTCTATACTGCACGATGGGCCACATTTTTCTTAATCTGGG
tgttgac putative branch site (score: 3)
ttttctgtt CT-rich tract
taaaagtt TA-rich tract