1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
gtgagttggattcgccctacccacctcacattattttggaaccgtttgtttacttgcgtatatgttacattcctcacagaaactagtaaaataaagatagtacgactatttgtgacgcactgagataagtcgtaacgagaccctgtttcatgttatgcagGGTCAGTGGAGACGTGGGCGACTGAAAAAGAAAGTGAAGCTGAGCCCCTGAACATTTAGGTTAGCCTGTAGGTGGTGCCCAAAGTATAGTGTTACATACA
species | Physcomitrella patens |
transcript | PP1S8_271V6.1 |
intron # | 7 |
splice site | 3' |
intron type | U2 |
EST: GGGTATCTTGCAGCGGCGTCTCTTGATGGTCTCCGATAAGCACAGGAGCA GGTCAGTGGAGACGTGGGCGACTGAAAAAGAAAGTGAAGCTGAGCCCCCTGEST: gi|162272122|gb|FC447916.1|FC447916
genomic: GGGTATCTTGCAGCGGCGTCTCTTGATGGTCTCCGATAAGCACAGGAGCAgtgagttgga ... tgttatgcagGGTCAGTGGAGACGTGGGCGACTGAAAAAGAAAGTGAAGCTGAGCCCC-TG
EST: GGGTATCTTGCAGCGGCGTCTCTTGATGGTCTCCGATAAGCACAGGAGCA GGTCAGTGGAGACGTGGGCGACTGAAAAAGAAAGTGAAGCTGAGCCCCTGAEST: gi|37851200|gb|BJ609208.1|BJ609208
genomic: GGGTATCTTGCAGCGGCGTCTCTTGATGGTCTCCGATAAGCACAGGAGCAgtgagttgga ... tgttatgcagGGTCAGTGGAGACGTGGGCGACTGAAAAAGAAAGTGAAGCTGAGCCCCTGA
EST: GGGTATCTTGCAGCGGCGTCTCTTGATGGTCTCCGATAAGCACAGGAGCA GGTCAGTGGAGACGTGGGCGACTGAAAAAGAAAGTGAAGCTGAGCCCCTGAEST: gi|18334427|gb|BJ166444.1|BJ166444
genomic: GGGTATCTTGCAGCGGCGTCTCTTGATGGTCTCCGATAAGCACAGGAGCAgtgagttgga ... tgttatgcagGGTCAGTGGAGACGTGGGCGACTGAAAAAGAAAGTGAAGCTGAGCCCCTGA
EST: GGGTATCTTGCAGCGGCGTCTCNTNATGGTCTCCGATAAGCACAGGAGCA GGTCAGTGGAGACGTGGGCGACTGAAAAAGAAAGTGAAGCTGAGCCCCTGAEST: gi|208374375|gb|DC948407.1|DC948407
genomic: GGGTATCTTGCAGCGGCGTCTCTTGATGGTCTCCGATAAGCACAGGAGCAgtgagttgga ... tgttatgcagGGTCAGTGGAGACGTGGGCGACTGAAAAAGAAAGTGAAGCTGAGCCCCTGA
EST: GGGTATCTTGCAGCGGCGTCTCTTGATGGTCTCCGATAAGCACAGGAGCA GGTCAGTGGAGACGTGGGCGACTGAAAAAGAAAGTGAAGCTGAGCCCCTGAEST: gi|18334290|gb|BJ166307.1|BJ166307
genomic: GGGTATCTTGCAGCGGCGTCTCTTGATGGTCTCCGATAAGCACAGGAGCAgtgagttgga ... tgttatgcagGGTCAGTGGAGACGTGGGCGACTGAAAAAGAAAGTGAAGCTGAGCCCCTGA
EST: GGGTATCTTGCAGCGGCGTCTCTTGATGGTCTCCGATAAGCACAGGAGCA GGTCAGTGGAGACGTGGGCGACTGAAAAAGAAAGTGAAGCTGAGCCCCTGAEST: gi|18333333|gb|BJ165347.1|BJ165347
genomic: GGGTATCTTGCAGCGGCGTCTCTTGATGGTCTCCGATAAGCACAGGAGCAgtgagttgga ... tgttatgcagGGTCAGTGGAGACGTGGGCGACTGAAAAAGAAAGTGAAGCTGAGCCCCTGA
EST: GGGTATCTTGCAGCGGCGTCTCTTGATGGTCTCCGATAAGCACAGGAGCA GGTCAGTGGAGACGTGGGCGACTGAAAAAGAAAGTGAAGCTGAGCCCCTGAEST: gi|162160906|gb|FC336969.1|FC336969
genomic: GGGTATCTTGCAGCGGCGTCTCTTGATGGTCTCCGATAAGCACAGGAGCAgtgagttgga ... tgttatgcagGGTCAGTGGAGACGTGGGCGACTGAAAAAGAAAGTGAAGCTGAGCCCCTGA
EST: GGGTATCTTGCAGCGGCGTCTCTTGATGGTCTCCGATAAGCACAGGAGCA GGTCAGTGGAGACGTGGGCGACTGAAAAAGAAAGTGAAGCTGAGCCCCTGAEST: gi|208365737|gb|DC944165.1|DC944165
genomic: GGGTATCTTGCAGCGGCGTCTCTTGATGGTCTCCGATAAGCACAGGAGCAgtgagttgga ... tgttatgcagGGTCAGTGGAGACGTGGGCGACTGAAAAAGAAAGTGAAGCTGAGCCCCTGA
EST: GGGTATCTTGCAGCGGCGTCTCTTGATGGTCTCCGATAAGCACAGGAGCA GGTCAGTGGAGACGTGGGCGACTGAAAAAGAAAGTGAAGCTGAGCCCCTGAEST: gi|162160905|gb|FC336968.1|FC336968
genomic: GGGTATCTTGCAGCGGCGTCTCTTGATGGTCTCCGATAAGCACAGGAGCAgtgagttgga ... tgttatgcagGGTCAGTGGAGACGTGGGCGACTGAAAAAGAAAGTGAAGCTGAGCCCCTGA
EST: GGGTATCTTGCAGCGGCGTCTCTTGATGGTCTCCGATAAGCACAGGAGCA GGTCAGTGGAGACGTGGGCGACTGAAAAAGAAAGTGAAGCTGAGCCCCTGAEST: gi|162186224|gb|FC362156.1|FC362156
genomic: GGGTATCTTGCAGCGGCGTCTCTTGATGGTCTCCGATAAGCACAGGAGCAgtgagttgga ... tgttatgcagGGTCAGTGGAGACGTGGGCGACTGAAAAAGAAAGTGAAGCTGAGCCCCTGA
EST: GGGTATCTTGCAGCGGCGTCTCTTGATGGTCTCCGATAAGCACAGGAGCA GGTCAGTGGAGACGTGGGCGACTGAAAAAGAAAGTGAAGCTGAGCCCCTGAEST: gi|37824740|gb|BJ582806.1|BJ582806
genomic: GGGTATCTTGCAGCGGCGTCTCTTGATGGTCTCCGATAAGCACAGGAGCAgtgagttgga ... tgttatgcagGGTCAGTGGAGACGTGGGCGACTGAAAAAGAAAGTGAAGCTGAGCCCCTGA
EST: GGGTATCTTGCAGCGGCGTCTCTTGATGGTCTCCGATAAGCACAGGAGCA GGTCAGTGGAGACGTGGGCGACTGAAAAAGAAAGTGAAGCTGAGCCCCTGAEST: gi|37851199|gb|BJ609207.1|BJ609207
genomic: GGGTATCTTGCAGCGGCGTCTCTTGATGGTCTCCGATAAGCACAGGAGCAgtgagttgga ... tgttatgcagGGTCAGTGGAGACGTGGGCGACTGAAAAAGAAAGTGAAGCTGAGCCCCTGA
EST: GGGTATCTTGCAGCGGCGTCTCTTGATGGTCTCCGATAAGCACAGGAGCA GGTCAGTGGAGACGTGGGCGACTGAAAAAGAAAGTGAAGCTGAGCCCCTGAEST: gi|162187638|gb|FC364095.1|FC364095
genomic: GGGTATCTTGCAGCGGCGTCTCTTGATGGTCTCCGATAAGCACAGGAGCAgtgagttgga ... tgttatgcagGGTCAGTGGAGACGTGGGCGACTGAAAAAGAAAGTGAAGCTGAGCCCCTGA
EST: GGGTATCTTGCAGCGGCGTCTCTTGATGGTCTCCGATAAGCACAGGAGCA GGTCAGTGGAGACGTGGGCGACTGAAAAAGAAAGTGAAGCTGAGCCCCTGAEST: gi|162274079|gb|FC450151.1|FC450151
genomic: GGGTATCTTGCAGCGGCGTCTCTTGATGGTCTCCGATAAGCACAGGAGCAgtgagttgga ... tgttatgcagGGTCAGTGGAGACGTGGGCGACTGAAAAAGAAAGTGAAGCTGAGCCCCTGA
EST: GGGTATCTTGCAGCGGCGTCTCTTGATGGTCTCCGATAAGCACAGGAGCA GGTCAGTGGAGACGTGGGCGACTGAAAAAGAAAGTGAAGCTGAGCCCCTGAEST: gi|208356198|gb|DC946246.1|DC946246
genomic: GGGTATCTTGCAGCGGCGTCTCTTGATGGTCTCCGATAAGCACAGGAGCAgtgagttgga ... tgttatgcagGGTCAGTGGAGACGTGGGCGACTGAAAAAGAAAGTGAAGCTGAGCCCCTGA
EST: GGGTATCTTGCAGCGGCGTCTCTTGATGGTCTCCGATAAGCACAGGAGCA GGTCAGTGGAGACGTGGGCGACTGAAAAAGAAAGTGAAGCTGAGCCCCTGAEST: gi|37824742|gb|BJ582808.1|BJ582808
genomic: GGGTATCTTGCAGCGGCGTCTCTTGATGGTCTCCGATAAGCACAGGAGCAgtgagttgga ... tgttatgcagGGTCAGTGGAGACGTGGGCGACTGAAAAAGAAAGTGAAGCTGAGCCCCTGA
EST: GGGTATCTTGCAGCGGCGTCTCTTGATGGTCTCCGATAAGCACAGGAGCA GGTCAGTGGAGACGTGGGCGACTGAAAAAGAAAGTGAAGCTGAGCCCCTGAEST: gi|162192968|gb|FC371951.1|FC371951
genomic: GGGTATCTTGCAGCGGCGTCTCTTGATGGTCTCCGATAAGCACAGGAGCAgtgagttgga ... tgttatgcagGGTCAGTGGAGACGTGGGCGACTGAAAAAGAAAGTGAAGCTGAGCCCCTGA
EST: GGGTATCTTGCAGCGGCGTCTCTTGATGGTCTCCGATAAGCACAGGAGCA GGTCAGTGGAGACGTGGGCGACTGAAAAAGAAAGTGAAGCTGAGCCCCTGAEST: gi|162201894|gb|FC376892.1|FC376892
genomic: GGGTATCTTGCAGCGGCGTCTCTTGATGGTCTCCGATAAGCACAGGAGCAgtgagttgga ... tgttatgcagGGTCAGTGGAGACGTGGGCGACTGAAAAAGAAAGTGAAGCTGAGCCCCTGA
EST: GGGTATCTTGCAGCGGCGTCTCTTGATGGTCTCCGATAAGCACAGGAGCA GGTCAGTGGAGACGTGGGCGACTGAAAAAGAAAGTGAAGCTGAGCCCCTGA
genomic: GGGTATCTTGCAGCGGCGTCTCTTGATGGTCTCCGATAAGCACAGGAGCAgtgagttgga ... tgttatgcagGGTCAGTGGAGACGTGGGCGACTGAAAAAGAAAGTGAAGCTGAGCCCCTGA
ctatttgtgacgcactgagataagtcgtaacgagaccctgtttcatgttatgcagGGTCAGTGGAGACGTGGGCGACTGAAAAAGAAAGTGAAGCTGAGCCCCTGAACATTTAGGTTAGCCTGTAGGTGGTGCCCAAAGTATAGTGTTACATACA
tcgtaac putative branch site (score: 2)
atgttat TA-rich tract