1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
...ctttgtttgtgttttcctctgctatgggatatctctaattcatgagcttgcgcgccagtacaaataatatcttatgtgaaggggtttttgtttgatgtagGAGCAATCGTTGTCTCCAATGTCACCCTATGGTGCACATGGCGGGACTCCAAGGTCTACCTATCCTAGATCTTTAATACGCACTCCTAGTATGGATCGAA
species | Physcomitrella patens |
transcript | PP1S7_365V6.1 |
intron # | 7 |
splice site | 3' |
intron type | U2 |
EST: GTCGGAGGCTATCAAATGGTTACCTTGGCTCTGAATTTGATGAAGGAAAA GAGCAATCGTTGTCTCCAATGTCACCCTATGGTGCACATGGCGGGACTCCA
genomic: GTCGGAGGCTATCAAATGGTTACCTTGGCTCTGAATTTGATGAAGGAAAAgttagtgtga ... tttgatgtagGAGCAATCGTTGTCTCCAATGTCACCCTATGGTGCACATGGCGGGACTCCA
gcttgcgcgccagtacaaataatatcttatgtgaaggggtttttgtttgatgtagGAGCAATCGTTGTCTCCAATGTCACCCTATGGTGCACATGGCGGGACTCCAAGGTCTACCTATCCTAGATCTTTAATACGCACTCCTAGTATGGATCGAA
gtttgat putative branch site (score: 1)
tttttgttt CT-rich tract
tacaaataatatctta TA-rich tract