1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
...acaattatgaggttcttccctcgctagtcaatgccttatctttcacgctaggaaggattattatgaagtcaactactgatcctggtgatcatgtgtgcagCTGGACTTGGCGGGTACACGACGCTTTTTTGATGCTTTTTTCGATCTTGAAGCCCACCTCTGGCAAGGGTTCCTGTCTTCACGTCTTTATTTCATTGAG
species | Physcomitrella patens |
transcript | PP1S55_202V6.1 |
intron # | 7 |
splice site | 3' |
intron type | U2 |
EST: GGCAACAACAACGAGCTTTTTTCTGTTTTGGCATGGAGGTTCTCCTCAAG CTGGACTTGGCGGGTACACGACGCTTTTTTGATGCTTTTTTCGATCTTGAA
genomic: GGCAACAACAACGAGCTTTTTTCTGTTTTGGCATGGAGGTTCTCCTCAAGgtattccatc ... atgtgtgcagCTGGACTTGGCGGGTACACGACGCTTTTTTGATGCTTTTTTCGATCTTGAA
cgctaggaaggattattatgaagtcaactactgatcctggtgatcatgtgtgcagCTGGACTTGGCGGGTACACGACGCTTTTTTGATGCTTTTTTCGATCTTGAAGCCCACCTCTGGCAAGGGTTCCTGTCTTCACGTCTTTATTTCATTGAG
tactgat putative branch site (score: 2)
attattatgaa TA-rich tract