1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
gtacgcaaggaatgttcagaaaatttgctagagcactttggtagattgttttttcacctattgttcgactgaataaagctgtagatggtgtagagctgatctatgtaagcttatatgaatcttgggttgtgctatttcagAGTTTGTTGAGGTCTTCTCTCGTAATCACCTCAAAATGCGCGTGTGGGAACGGGGCGCCG
species | Physcomitrella patens |
transcript | PP1S51_241V6.1 |
intron # | 7 |
splice site | 3' |
intron type | U2 |
EST: TGGACCTCTATTTGAGCACCACGAAGTGTTTCCTGCGAGAACAAACACAG AGTTTGTTGAGGTCTTCTCTCGTAATCACCTCAAAATGCGCGTGTGGGAACEST: gi|37834821|gb|BJ592833.1|BJ592833
genomic: TGGACCTCTATTTGAGCACCACGAAGTGTTTCCTGCGAGAACAAACACAGgtacgcaagg ... gctatttcagAGTTTGTTGAGGTCTTCTCTCGTAATCACCTCAAAATGCGCGTGTGGGAAC
EST: TGGACCTCTATTTGAGCACCACGAAGTGTTTCCTGCGAGAACAAACACAG AGTTTGTTGAGGTCTTCTCTCGTAATCACCTCAAAATGCGCGTGTGGGAACEST: gi|37835319|gb|BJ593331.1|BJ593331
genomic: TGGACCTCTATTTGAGCACCACGAAGTGTTTCCTGCGAGAACAAACACAGgtacgcaagg ... gctatttcagAGTTTGTTGAGGTCTTCTCTCGTAATCACCTCAAAATGCGCGTGTGGGAAC
EST: TGGACCTCTATTTGAGCACCACGAAGTGTTTCCTGCGAGAACAAACACAG AGTTTGTTGAGGTCTTCTCTCGTAATCACCTCAAAATGCGCGTGTGGGAACEST: gi|162186404|gb|FC362960.1|FC362960
genomic: TGGACCTCTATTTGAGCACCACGAAGTGTTTCCTGCGAGAACAAACACAGgtacgcaagg ... gctatttcagAGTTTGTTGAGGTCTTCTCTCGTAATCACCTCAAAATGCGCGTGTGGGAAC
EST: TGGACCTCTATTTGAGCACCACGAAGTGTTTCCTGCGAGAACAAACACAG AGTTTGTTGAGGTCTTCTCTCGTAATCACCTCAAAATGCGCGTGTGGGAACEST: gi|162252751|gb|FC428788.1|FC428788
genomic: TGGACCTCTATTTGAGCACCACGAAGTGTTTCCTGCGAGAACAAACACAGgtacgcaagg ... gctatttcagAGTTTGTTGAGGTCTTCTCTCGTAATCACCTCAAAATGCGCGTGTGGGAAC
EST: TGGACCTCTATTTGAGCACCACGAAGTGTTTCCTGCGAGAACAAACACAG AGTTTGTTGAGGTCTTCTTTGGTAATCACCTCAAAATGCGCGTGTGGGAACEST: gi|67700556|gb|BJ960789.1|BJ960789
genomic: TGGACCTCTATTTGAGCACCACGAAGTGTTTCCTGCGAGAACAAACACAGgtacgcaagg ... gctatttcagAGTTTGTTGAGGTCTTCTCTCGTAATCACCTCAAAATGCGCGTGTGGGAAC
EST: GGACCTCTATTTTGAGCACCACGAAGTGTTTCCTGCGAGAACAAACACAG AGTTTGTTGAGGTCTTCTCTCGTAATCACCTCAAAATGCGCGTGTGGGAACEST: gi|162232388|gb|FC408822.1|FC408822
genomic: GGACCTCTA-TTTGAGCACCACGAAGTGTTTCCTGCGAGAACAAACACAGgtacgcaagg ... gctatttcagAGTTTGTTGAGGTCTTCTCTCGTAATCACCTCAAAATGCGCGTGTGGGAAC
EST: TGGACCTCTATTTGAGCACCACGAAGTGTTTCCTGCGAGAACAAACACAG AGTTTGTTGAGGTCTTCTCTCGTAATCACCTCAAAATGCGCGTGTGGGAACEST: gi|162186405|gb|FC362961.1|FC362961
genomic: TGGACCTCTATTTGAGCACCACGAAGTGTTTCCTGCGAGAACAAACACAGgtacgcaagg ... gctatttcagAGTTTGTTGAGGTCTTCTCTCGTAATCACCTCAAAATGCGCGTGTGGGAAC
EST: TGGACCTCTATTTGAGCACCACGAAGTGTTTCCTGCGAGAACAAACACAG AGTTTGTTGAGGTCTTCTCTCGTAATCACCTCAAAATGCGCGTGTGGGAACEST: gi|22132121|gb|BQ826991.1|BQ826991
genomic: TGGACCTCTATTTGAGCACCACGAAGTGTTTCCTGCGAGAACAAACACAGgtacgcaagg ... gctatttcagAGTTTGTTGAGGTCTTCTCTCGTAATCACCTCAAAATGCGCGTGTGGGAAC
EST: TGGACCTCTATTTGAGCACCACGAAGTGTTTCCTGCGAGAACAAACACAG AGTTTGTTGAGGTCTTCTCTCGTAATCACCTCAAAATGCGCGTGTGGGAACEST: gi|22492339|gb|BU052262.1|BU052262
genomic: TGGACCTCTATTTGAGCACCACGAAGTGTTTCCTGCGAGAACAAACACAGgtacgcaagg ... gctatttcagAGTTTGTTGAGGTCTTCTCTCGTAATCACCTCAAAATGCGCGTGTGGGAAC
EST: TGGACCTCTATTTGAGCACCACGAAGTGTTTCCTGCGAGAACAAACACAG AGTTTGTTGAGGTCTTCTCTCGTAATCACCTCAAAATGCGCGTGTGGGAACEST: gi|22491789|gb|BU051712.1|BU051712
genomic: TGGACCTCTATTTGAGCACCACGAAGTGTTTCCTGCGAGAACAAACACAGgtacgcaagg ... gctatttcagAGTTTGTTGAGGTCTTCTCTCGTAATCACCTCAAAATGCGCGTGTGGGAAC
EST: TGGACCTCTATTTGAGCACCACGAAGTGTTTCCTGCGAGAACAAACACAG AGTTTGTTGAGGTCTTCTCTCGTAATCACCTCAAAATGCGCGTGTGGGAACEST: gi|37834965|gb|BJ592977.1|BJ592977
genomic: TGGACCTCTATTTGAGCACCACGAAGTGTTTCCTGCGAGAACAAACACAGgtacgcaagg ... gctatttcagAGTTTGTTGAGGTCTTCTCTCGTAATCACCTCAAAATGCGCGTGTGGGAAC
EST: TGGACCTCTATTTGAGCACCACGAAGTGTTTCCTGCGAGAACAAACACAG AGTTTGTTGAGGTCTTCTCTCGTAATCACCTCAAAATGCGCGTGTGGGAACEST: gi|162243414|gb|FC425110.1|FC425110
genomic: TGGACCTCTATTTGAGCACCACGAAGTGTTTCCTGCGAGAACAAACACAGgtacgcaagg ... gctatttcagAGTTTGTTGAGGTCTTCTCTCGTAATCACCTCAAAATGCGCGTGTGGGAAC
EST: TGGACCTCTATTTGAGCACCACGAAGTGTTTCCTGCGAGAACAAACACAG AGTTTGTTGAGGTCTTCTCTCGTAATCACCTCAAAATGCGCGTGTGGGAACEST: gi|67726581|gb|BJ976840.1|BJ976840
genomic: TGGACCTCTATTTGAGCACCACGAAGTGTTTCCTGCGAGAACAAACACAGgtacgcaagg ... gctatttcagAGTTTGTTGAGGTCTTCTCTCGTAATCACCTCAAAATGCGCGTGTGGGAAC
EST: TGGACCTCTATTTGAGCACCACGAAGTGTTTCCTGCGAGAACAAACACAG AGTTTGTTGAGGTCTTCTCTCGTAATCACCTCAAAATGCGCGTGTGGGAACEST: gi|162269244|gb|FC445801.1|FC445801
genomic: TGGACCTCTATTTGAGCACCACGAAGTGTTTCCTGCGAGAACAAACACAGgtacgcaagg ... gctatttcagAGTTTGTTGAGGTCTTCTCTCGTAATCACCTCAAAATGCGCGTGTGGGAAC
EST: TGGACCTCTATTTGAGCACCACGAAGTGTTTCCTGCGAGAACAAACACAG AGTTTGTTGAGGTCTTCTCTCGTAATCACCTCAAAATGCGCGTGTGGGAACEST: gi|37849296|gb|BJ607304.1|BJ607304
genomic: TGGACCTCTATTTGAGCACCACGAAGTGTTTCCTGCGAGAACAAACACAGgtacgcaagg ... gctatttcagAGTTTGTTGAGGTCTTCTCTCGTAATCACCTCAAAATGCGCGTGTGGGAAC
EST: TGGACCTCTATTTGAGCACCACGAAGTGTTTCCTGCGAGAACAAACACAG AGTTTGTTGAGGTCTTCTCTCGTAATCACCTCAAAATGCGCGTGTGGGAACEST: gi|37841391|gb|BJ599399.1|BJ599399
genomic: TGGACCTCTATTTGAGCACCACGAAGTGTTTCCTGCGAGAACAAACACAGgtacgcaagg ... gctatttcagAGTTTGTTGAGGTCTTCTCTCGTAATCACCTCAAAATGCGCGTGTGGGAAC
EST: TGGACCTCTATTTGAGCACCACGAAGTGTTTCCTGCGAGAACAAACACAG AGTTTGTTGAGGTCTTCTCTCGTAATCACCTCAAAATGCGCGTGTGGGAACEST: gi|22133223|gb|BQ827614.1|BQ827614
genomic: TGGACCTCTATTTGAGCACCACGAAGTGTTTCCTGCGAGAACAAACACAGgtacgcaagg ... gctatttcagAGTTTGTTGAGGTCTTCTCTCGTAATCACCTCAAAATGCGCGTGTGGGAAC
EST: TGGACCTCTATTTGAGCACCACGAAGTGTTTCCTGCGAGAACAAACACAG AGTTTGTTGAGGTCTTCTCTCGTAATCACCTCAAAATGCGCGTGEST: gi|162252752|gb|FC428789.1|FC428789
genomic: TGGACCTCTATTTGAGCACCACGAAGTGTTTCCTGCGAGAACAAACACAGgtacgcaagg ... gctatttcagAGTTTGTTGAGGTCTTCTCTCGTAATCACCTCAAAATGCGCGTG
EST: TGGACCTCTATTTGAGCACCACGAAGTGTTTCCTGCGAGAACAAACACAG AGTTTGTTGAGGTCTTCTCTCGTAATCACCTCAAAATGCGCGTGTGGGAACEST: gi|37827317|gb|BJ585329.1|BJ585329
genomic: TGGACCTCTATTTGAGCACCACGAAGTGTTTCCTGCGAGAACAAACACAGgtacgcaagg ... gctatttcagAGTTTGTTGAGGTCTTCTCTCGTAATCACCTCAAAATGCGCGTGTGGGAAC
EST: TGGACCTCTATTTGAGCACCACGAAGTGTTTCCTGCGAGAACAAACACAG AGTTTGTTGAGGTCTTCTCTCGTAATCACCTCAAAATGCGCGTGTGGGAACEST: gi|162233272|gb|FC409614.1|FC409614
genomic: TGGACCTCTATTTGAGCACCACGAAGTGTTTCCTGCGAGAACAAACACAGgtacgcaagg ... gctatttcagAGTTTGTTGAGGTCTTCTCTCGTAATCACCTCAAAATGCGCGTGTGGGAAC
EST: TGGACCTCTATTTGAGCACCACGAAGTGTTTCCTGCGAGAACAAACACAG AGTTTGTTGAGGTCTTCTCTCGTAATCACCTCAAAATGCGCGTGTGGGAACEST: gi|162243413|gb|FC425109.1|FC425109
genomic: TGGACCTCTATTTGAGCACCACGAAGTGTTTCCTGCGAGAACAAACACAGgtacgcaagg ... gctatttcagAGTTTGTTGAGGTCTTCTCTCGTAATCACCTCAAAATGCGCGTGTGGGAAC
EST: TGGACCTCTATTTGAGCACCACGAAGTGTTTCCTGCGAGAACAAACACAG AGTTTGTTGAGGTCTTCTCTCGTAATCACCTCAAAATGCGCGTGTGGGAACEST: gi|162169969|gb|FC345909.1|FC345909
genomic: TGGACCTCTATTTGAGCACCACGAAGTGTTTCCTGCGAGAACAAACACAGgtacgcaagg ... gctatttcagAGTTTGTTGAGGTCTTCTCTCGTAATCACCTCAAAATGCGCGTGTGGGAAC
EST: GAAGTGTTTCCTGCGAGAACAAACACAG AGTTTGTTGAGGTCTTCTTTCGTAATCACCTCAAAATGCGCGTGTGGGAAC
genomic: GAAGTGTTTCCTGCGAGAACAAACACAGgtacgcaagg ... gctatttcagAGTTTGTTGAGGTCTTCTCTCGTAATCACCTCAAAATGCGCGTGTGGGAAC
tggtgtagagctgatctatgtaagcttatatgaatcttgggttgtgctatttcagAGTTTGTTGAGGTCTTCTCTCGTAATCACCTCAAAATGCGCGTGTGGGAACGGGGCGCCG
agctgat putative branch site (score: 10)
ctatttc putative PPT
ttatatgaat TA-rich tract