Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   		7  
 5'  3'   		8  
 5'  3'   		9  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...ccgccagtgtattgtttactcaaacgctaagtactgtgtattcacgtggcctacttcgatgcttatcgtggtgcgatttgtttatggaacttgtgagcagATGGCCCGTTCAAAGAAAGCGTGCATTGTGTTTTTTGATGAGGTAGATGCCATTGGAGGTGCTCGTTTCGACGATGGGTTGGGAGGTGATAACGAGGTTC

Basic information

species Physcomitrella patens
transcript PP1S49_256V6.1
intron # 7
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: PP1S49_256V6.1 (Physcomitrella patens), 3'ss of exon 7
lower sequence: LOC_Os02g54340.2 (Oryza sativa), 3'ss of exon 7
------ccgccagtgt-attgtttactcaaacgc-taagtactgtgtattcac-gtggcctacttcgatgcttatcgtggtgcgatttgtttatggaacttgtgagcagATGGCCCGTTCAAAGAAAGCGTGCATTGTGTTTTTTGATGAGGTAGATGCCATTGGAGGTGCTCGTTTCGACGATGGGTTGGGAGGTGATAACGAGGTTC
       |  || ||| |    | ||   |||   | | |  | || | | |  |||      || ||     ||  |  ||  |            ||||| |   |||||||||| || |||||||| |||||||| || ||||||||||| ||||| |||||||||||||| ||||| |||||| | || |||||||| |||||||
gtatgtgcaacattgtgaaaactcacaagaacttatcaattttctgcacttaaagtgcttctgtttgacaagcatgtttctgaaaaaaaaaatgttgacttg-gtttagATGGCCCGCTCGAAGAAAGCATGCATTGTCTTCTTTGATGAGGTTGATGCTATTGGAGGTGCTCGCTTCGATGATGGGGTTGGGGGTGATAATGAGGTTC

upper sequence: PP1S49_256V6.1 (Physcomitrella patens), 3'ss of exon 7
lower sequence: GRMZM2G181359_T01 (Zea mays), 3'ss of exon 7
ccgccagtgtattgtttactcaaacgctaagtactgtgtattcacgtggcctacttcgatgcttatcgtggtgcgatttgtttatggaacttgtg---agcagATGGCCCGTTCAAAGAAAGCGTGCATTGTGTTTTTTGATGAGGTAGATGCCATTGGAGGTGCTCGTTTCGACGATGGGTTGGGAGGTGATAACGAGGTTC
            | | ||       |  ||    |   ||||  |   | ||  |    | | | |  |      |||| |  |  ||| |  |     | |||||||||| |||||||||||||||||||| || || ||||| || ||||| ||||| ||||||||||| || |||||| |||| || || || ||||| |
-----------gtatatatatggctgtgaatctgtaaatattatcccagtcttttcatgtacgtgtgttcaacatatttctgaaatgaattcttctatggtagATGGCCCGCTCAAAGAAAGCGTGCATTGTATTCTTCGATGAAGTTGATGCTATTGGTGGTGCTCGTTTTGATGATGGGGTGGGTGGCGACAATGAGGTGC

upper sequence: PP1S49_256V6.1 (Physcomitrella patens), 3'ss of exon 7
lower sequence: GRMZM2G110185_T03 (Zea mays), 3'ss of exon 7
ccgccagtgtattgtttactcaaacgctaagtactgtgtattcacgtggcctacttcgatgcttatcgtggtgcgatttgtttatggaacttgtgagcagATGGCCCGTTCAAAGAAAGCGTGCATTGTGTTTTTTGATGAGGTAGATGCCATTGGAGGTGCTCGTTTCGACGATGGGTTGGGAGGTGATAACGAGGTTC
                  ||   |  |     |  ||  || ||   |   |  | |    |  ||  |  |     |     |    | |     | |||||||||| |||||||| || |||||||| || |||||||| || ||||| ||||| ||||||||||| || |||||| | || ||||| || ||||| |
----------------ggctgtgaatccgtaaaaggttcatcca---gtttttttcctgcacacatgttaatatttctgaaacaaaatattctattgtagATGGCCCGCTCAAAGAAGGCATGCATTGTATTCTTTGATGAAGTTGATGCAATTGGTGGTGCTCGTTTTGATGATGGGGTTGGTGGTGACAATGAGGTGC

upper sequence: PP1S49_256V6.1 (Physcomitrella patens), 3'ss of exon 7
lower sequence: GRMZM2G110185_T01 (Zea mays), 3'ss of exon 7
ccgccagtgtattgtttactcaaacgctaagtactgtgtattcacgtggcctacttcgatgcttatcgtggtgcgatttgtttatggaacttgtgagcagATGGCCCGTTCAAAGAAAGCGTGCATTGTGTTTTTTGATGAGGTAGATGCCATTGGAGGTGCTCGTTTCGACGATGGGTTGGGAGGTGATAACGAGGTTC
      || |||      ||   |  |     |  ||  || ||   |   |  | |    |  ||  |  |     |     |    | |     | |||||||||| |||||||| || |||||||| || |||||||| || ||||| ||||| ||||||||||| || |||||| | || ||||| || ||||| |
------gtatatctagggctgtgaatccgtaaaaggttcatcca---gtttttttcctgcacacatgttaatatttctgaaacaaaatattctattgtagATGGCCCGCTCAAAGAAGGCATGCATTGTATTCTTTGATGAAGTTGATGCAATTGGTGGTGCTCGTTTTGATGATGGGGTTGGTGGTGACAATGAGGTGC

upper sequence: PP1S49_256V6.1 (Physcomitrella patens), 3'ss of exon 7
lower sequence: GLYMA07G05220.1 (Glycine max), 3'ss of exon 7
ccgccagtgtattgtttactcaaacgctaagtactgtgtattcacgtggcctacttcgatgcttatcgtggtgcgatttgtttatggaacttgtgagcagATGGCCCGTTCAAAGAAAGCGTGCATTGTGTTTTTTGATGAGGTAGATGCCATTGGAGGTGCTCGTTTCGACGATGGGTTGGGAGGTGATAACGAGGTTC
     |   |       ||||   | |||  |  | | |||   | | |  | | |  |     ||| |    | |    |||      ||  |    ||||||| ||||||||||| || |||||||||||||||||||| || ||||| ||||||||||| || || || |||||  | || ||||| || |||||||
---gtaaaatgcacaagactcgtcctctagcttttttttat---cattgtttccatgaaaataaatcatttgactaaaatttt------ctcatttttagATGGCTCGTTCAAAGAAGGCATGCATTGTGTTTTTTGATGAAGTTGATGCAATTGGAGGTGCACGATTTGATGATGGCGTTGGTGGTGACAATGAGGTTC

upper sequence: PP1S49_256V6.1 (Physcomitrella patens), 3'ss of exon 7
lower sequence: GLYMA16G01810.1 (Glycine max), 3'ss of exon 7
ccgccagtgtattgtttactcaaacgctaagtactgtgtattca-cgtggcctacttcgatgcttatcgtggtgcgatttgtttatggaacttgtgagcagATGGCCCGTTCAAAGAAAGCGTGCATTGTGTTTTTTGATGAGGTAGATGCCATTGGAGGTGCTCGTTTCGACGATGGGTTGGGAGGTGATAACGAGGTTC
            |   |||  ||    |   | ||   | || | ||| |  | | |  |     ||| |    | |    |||||    |||||    ||||||| ||||||||||| || |||||||||||||||||||| || ||||| ||||||||||| || || || |||||  | || ||||| || |||||||
-----------gtaaatacataagacgtgccttctagcttttgatcgttgtttccatgaaattcaatcatttgactaaaattttatct--cttgt----agATGGCTCGTTCAAAGAAGGCATGCATTGTGTTTTTTGATGAAGTTGATGCAATTGGAGGTGCACGATTTGATGATGGTGTTGGTGGTGACAATGAGGTTC

upper sequence: PP1S49_256V6.1 (Physcomitrella patens), 3'ss of exon 7
lower sequence: GLYMA19G45140.1 (Glycine max), 3'ss of exon 7
ccgccagtgtattgtttactcaaacgctaagtactgtgtattcacgtggcctacttcgatgcttatcgtggtgcgatttgttt--atggaacttgtgag-----cagATGGCCCGTTCAAAGAAAGCGTGCATTGTGTTTTTTGATGAGGTAGATGCCATTGGAGGTGCTCGTTTCGACGATGGGTTGGGAGGTGATAACGAGGTTC
        ||     |  || | | ||     ||| | | || |  |    |    || |  ||  | ||    |||||  |   |   || || |  |      ||||||||||||||||||| || |||||||||||||| ||||| || ||||| ||||| ||||| || || || |||||  | || |||||||| |||||||
--------gtgagaatggctaagatgc-----actttttttttaaattttttttcccgttattt-ccatgacatgatttcatcgaactaaaattttatgtcctctagATGGCCCGTTCAAAGAAGGCATGCATTGTGTTTTTCGATGAAGTTGATGCAATTGGGGGTGCACGGTTTGATGATGGTGTTGGCGGTGATAATGAGGTTC

upper sequence: PP1S49_256V6.1 (Physcomitrella patens), 3'ss of exon 7
lower sequence: GLYMA03G42370.4 (Glycine max), 3'ss of exon 7
ccgccagtgtattgtttactcaaacgctaagtactgtgtattcacgtggcctacttcgatgcttatcgtggtgcgattt-gttta--tggaacttgtgagc----agATGGCCCGTTCAAAGAAAGCGTGCATTGTGTTTTTTGATGAGGTAGATGCCATTGGAGGTGCTCGTTTCGACGATGGGTTGGGAGGTGATAACGAGGTTC------------------
           |   |  || | | ||     ||  | |||| |  |    |  |||| || ||  | ||    |||||  | |   |  || |||    |    |||||||||| || ||||| || |||||||||||||||||||| || ||||| ||||| ||||| || || || |||||  | || |||||||| |||||||                  
----------gtgaatggctaagatgc-----accttctatttattttatatttttcgttgttt-ccatgacatgatttcatctgactaaaatttgatgtcctctagatggcccgctctaagaagGCATGCATTGTGTTTTTTGATGAAGTTGATGCAATTGGGGGTGCACGGTTTGATGATGGTGTTGGTGGTGATAATGAGGTTCAGCGCACTATGCTTGAAA

upper sequence: PP1S49_256V6.1 (Physcomitrella patens), 3'ss of exon 7
lower sequence: GLYMA03G42370.2 (Glycine max), 3'ss of exon 7
ccgccagtgtattgtttactcaaacgctaagtactgtgtattcacgtggcctacttcgatgcttatcgtggtgcgattt-gttta--tggaacttgtgagc----agATGGCCCGTTCAAAGAAAGCGTGCATTGTGTTTTTTGATGAGGTAGATGCCATTGGAGGTGCTCGTTTCGACGATGGGTTGGGAGGTGATAACGAGGTTC
           |   |  || | | ||     ||  | |||| |  |    |  |||| || ||  | ||    |||||  | |   |  || |||    |    |||||||||| || ||||| || |||||||||||||||||||| || ||||| ||||| ||||| || || || |||||  | || |||||||| |||||||
----------gtgaatggctaagatgc-----accttctatttattttatatttttcgttgttt-ccatgacatgatttcatctgactaaaatttgatgtcctctagATGGCCCGCTCTAAGAAGGCATGCATTGTGTTTTTTGATGAAGTTGATGCAATTGGGGGTGCACGGTTTGATGATGGTGTTGGTGGTGATAATGAGGTTC

upper sequence: PP1S49_256V6.1 (Physcomitrella patens), 3'ss of exon 7
lower sequence: Vv09s0002g00170.t01 (Vitis vinifera), 3'ss of exon 7
ccgccagtgtattgtttactcaaacgctaagtactgtgtattcacgtggcctact-tcgatgcttatcgtggtgcgatttgtttatggaacttgtgagc---agATGGCCCGTTCAAAGAAAGCGTGCATTGTGTTTTTTGATGAGGTAGATGCCATTGGAGGTGCTCGTTTCGACGATGGGTTGGGAGGTGATAACGAGGTTC
        ||          || | | | |  | | ||| ||||  |    || | |   || | || |   |    |  |  |       || |  ||   ||||||| || || || |||||||| ||||||||||||||||| ||||||||||| || ||||| ||||| || |||||  | || || || || ||||| |
--------gtcacaagctgccacatgttta-cagtttgtcttcatttattttattgttcttgatcattgctatattgtccgactgctacctttttttgctgcagATGGCACGCTCCAAAAAAGCGTGTATTGTGTTTTTTGATGAAGTAGATGCCATAGGGGGTGCGCGTTTTGATGATGGTGTTGGTGGGGACAATGAGGTCC

upper sequence: PP1S49_256V6.1 (Physcomitrella patens), 3'ss of exon 7
lower sequence: Vv11s0016g00230.t01 (Vitis vinifera), 3'ss of exon 7
ccgccagtgtattgtttactcaaacgctaagtactgtgtattcacgtggcctact-tcgatgcttatcgtggtgcgatttg--tttatggaacttgtgagc---agATGGCCCGTTCAAAGAAAGCGTGCATTGTGTTTTTTGATGAGGTAGATGCCATTGGAGGTGCTCGTTTCGACGATGGGTTGGGAGGTGATAACGAGGTTC
                         |  ||| | | | ||||  | ||    ||| |  |     ||     |   |   |  ||| ||| | |  |  ||   ||||||| || |||||||  || |||||||| ||||||||||| || |||||||| || ||||| ||||| || |||||   ||| || || |  || ||||
-------------------------gtaaaggaatatatatttccatgtttcactatttaattaaataacaatttaaccagcatttgtggcattaatttgctgtagATGGCACGCTCAAAGAGGGCTTGCATTGTCTTTTTTGATGAAGTTGATGCCATAGGTGGTGCACGTTTTGATGATGGTAAGGGTGGAGACAGAGAAGTTC

upper sequence: PP1S49_256V6.1 (Physcomitrella patens), 3'ss of exon 7
lower sequence: EFJ29161 (Selaginella moellendorffii), 3'ss of exon 7
ccgccagtgtattgtttactcaaacgctaagtactgtgtattcacgtggcc-tacttcgatgcttatcgtggtgcgatttgtttatggaacttgtgagcagATGGCCCGTTCAAAGAAAGCGTGCATTGTGTTTTTTGATGAGGTAGATGCCATTGGAGGTGCTCGTTTCGACGATGGGTTGGGAGGTGATAACGAGGTTC
                       | | ||  | |||||| |   | ||||  |  |   |    | |  |  | |  ||| | |       ||     ||||||||||| ||||||||||| |||||||| || ||||| || || ||||||||||| |||||  | |||||||| ||  | || || || ||||| || |
---------------------gtatgttacattctgtgtttattcctggcagtggtcttaaaagttttttttttccctttctct------ttttctttcagATGGCCCGATCAAAGAAAGCTTGCATTGTTTTCTTTGACGAAGTCGATGCCATTGGTGGTGCCAGATTCGACGACGGCATTGGTGGCGACAACGAAGTGC

upper sequence: PP1S49_256V6.1 (Physcomitrella patens), 3'ss of exon 7
lower sequence: EFJ13722 (Selaginella moellendorffii), 3'ss of exon 7
ccgccagtgtattgtttactcaaacgctaagtactgtgtattcacgtggc--ctacttcgatgcttatcgtggtgcgatttgtttatggaacttgtgagcagATGGCCCGTTCAAAGAAAGCGTGCATTGTGTTTTTTGATGAGGTAGATGCCATTGGAGGTGCTCGTTTCGACGATGGGTTGGGAGGTGATAACGAGGTTC
                       | | ||  | | |||| |   | ||||       |  |   || |  |  |    |||   | |     ||     ||||||||||| ||||||||||| |||||||| || ||||| || || ||||||||||| |||||  | |||||||| ||  | || || || ||||| || |
---------------------gtatgttacattccgtgtttattcctggcagtggtcttaaaattttttatttt---tttttcctttctctttttctttcagATGGCCCGATCAAAGAAAGCTTGCATTGTTTTCTTTGACGAAGTCGATGCCATTGGTGGTGCCAGATTCGACGACGGCATTGGTGGCGACAACGAAGTGC

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|208386966|gb|DC956935.1|DC956935
EST:     TTCAGAAATATGTAGGAGAGGGTGCTCGGATGGTCCGTGAGCTTTTCCAG                         ATGGCCCGTTCAAAGAAAGCGTGCATTGTGTTTTTTGATGAGGTAGATGCC
genomic: TTCAGAAATATGTAGGAGAGGGTGCTCGGATGGTCCGTGAGCTTTTCCAGgcaagtcaat ... ttgtgagcagATGGCCCGTTCAAAGAAAGCGTGCATTGTGTTTTTTGATGAGGTAGATGCC
EST: gi|67720356|gb|BJ970615.1|BJ970615
EST:     TTCAGAAATATGTAGGAGAGGGTGCTCGGATGGTCCGTGAGCTTTTCCAG                         ATGGCCCGTTCAAAGAAAGCGTGCATTGTGTTTTTTGATGAGGTAGATGCC
genomic: TTCAGAAATATGTAGGAGAGGGTGCTCGGATGGTCCGTGAGCTTTTCCAGgcaagtcaat ... ttgtgagcagATGGCCCGTTCAAAGAAAGCGTGCATTGTGTTTTTTGATGAGGTAGATGCC
EST: gi|67727435|gb|BJ977694.1|BJ977694
EST:     TTCAGAAATATGTAGGAGAGGGTGCTCGGATGGTCCGTGAGCTTTTCCAG                         ATGGCCCGTTCAAAGAAAGCGTGCATTGTGTTTTTTGATGAGGTAGATGCC
genomic: TTCAGAAATATGTAGGAGAGGGTGCTCGGATGGTCCGTGAGCTTTTCCAGgcaagtcaat ... ttgtgagcagATGGCCCGTTCAAAGAAAGCGTGCATTGTGTTTTTTGATGAGGTAGATGCC
EST: gi|208361197|gb|DC954303.1|DC954303
EST:     TTCAGAAATATGTAGGAGAGGGTGCTCGGATGGTCCGTGAGCTTTTCCAG                         ATGGCCCGTTCAAAGAAAGCGTGCATTGTGTTTTTTGATGAGGTAGATGCC
genomic: TTCAGAAATATGTAGGAGAGGGTGCTCGGATGGTCCGTGAGCTTTTCCAGgcaagtcaat ... ttgtgagcagATGGCCCGTTCAAAGAAAGCGTGCATTGTGTTTTTTGATGAGGTAGATGCC
EST: gi|67725511|gb|BJ975770.1|BJ975770
EST:     TTCAGAAATATGTAGGAGAGGGTGCTCGGATGGTCCGTGAGCTTTTCCAG                         ATGGCCCGTTCAAAGAAAGCGTGCATTGTGTTTTTTGATGAGGTAGATGCC
genomic: TTCAGAAATATGTAGGAGAGGGTGCTCGGATGGTCCGTGAGCTTTTCCAGgcaagtcaat ... ttgtgagcagATGGCCCGTTCAAAGAAAGCGTGCATTGTGTTTTTTGATGAGGTAGATGCC
EST: gi|67578758|gb|BJ950925.1|BJ950925
EST:     TTCAGAAATATGTAGGAGAGGGTGCTCGGATGGTCCGTGAGCTTTTCCAG                         ATGGCCCGTTCAAAGAAAGCGTGCATTGTGTTTTTTGATGAGGTAGATGCC
genomic: TTCAGAAATATGTAGGAGAGGGTGCTCGGATGGTCCGTGAGCTTTTCCAGgcaagtcaat ... ttgtgagcagATGGCCCGTTCAAAGAAAGCGTGCATTGTGTTTTTTGATGAGGTAGATGCC
EST: gi|67726155|gb|BJ976414.1|BJ976414
EST:     TTCAGAAATATGTAGGAGAGGGTGCTCGGATGGTCCGTGAGCTTTTCCAG                         ATGGCCCGTTCAAAGAAAGCGTGCATTGTGTTTTTTGATGAGGTAGATGCC
genomic: TTCAGAAATATGTAGGAGAGGGTGCTCGGATGGTCCGTGAGCTTTTCCAGgcaagtcaat ... ttgtgagcagATGGCCCGTTCAAAGAAAGCGTGCATTGTGTTTTTTGATGAGGTAGATGCC
EST: gi|208380596|gb|DC919368.1|DC919368
EST:     TTCAGAAATATGTAGGAGAGGGTGCTCGGATGGTCCGTGAGCTTTTCCAG                         ATGGCCCGTTCAAAGAAAGCGTGCATTGTGTTTTTTGATGAGGTAGATGCC
genomic: TTCAGAAATATGTAGGAGAGGGTGCTCGGATGGTCCGTGAGCTTTTCCAGgcaagtcaat ... ttgtgagcagATGGCCCGTTCAAAGAAAGCGTGCATTGTGTTTTTTGATGAGGTAGATGCC
EST: gi|37839264|gb|BJ597272.1|BJ597272
EST:     TTCAGAAATATGTAGGAGAGGGTGCTCGGATGGTCCGTGAGCTTTTCCAG                         ATGGCCCGTTCAAAGAAAGCGTGCATTGTGTTTTTTGATGAGGTAGATGCC
genomic: TTCAGAAATATGTAGGAGAGGGTGCTCGGATGGTCCGTGAGCTTTTCCAGgcaagtcaat ... ttgtgagcagATGGCCCGTTCAAAGAAAGCGTGCATTGTGTTTTTTGATGAGGTAGATGCC
EST: gi|67700123|gb|BJ960356.1|BJ960356
EST:     TTCAGAAATATGTANGAGAGGGTGCTCGGATGGTCCGTGAGCTTTTCCAG                         ATGGCCCGTTCAAAGAAAGCGTGCATTGTGTTTTTTGATGAGGTAGATGCC
genomic: TTCAGAAATATGTAGGAGAGGGTGCTCGGATGGTCCGTGAGCTTTTCCAGgcaagtcaat ... ttgtgagcagATGGCCCGTTCAAAGAAAGCGTGCATTGTGTTTTTTGATGAGGTAGATGCC
EST: gi|208400821|gb|DC925101.1|DC925101
EST:     TTCAGAAATATGTAGGAGAGGGTGCTCGGATGGTCCGTGAGCTTTTCCAG                         ATGGCCCGTTCAAAGAAAGCGTGCATTGTGTTTTTTGATGAGGTAGATGCC
genomic: TTCAGAAATATGTAGGAGAGGGTGCTCGGATGGTCCGTGAGCTTTTCCAGgcaagtcaat ... ttgtgagcagATGGCCCGTTCAAAGAAAGCGTGCATTGTGTTTTTTGATGAGGTAGATGCC

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 34 (upstream exon), 25 (downstream exon)
Score: 17

TGCCAATAGGACAGATGCTTGCTTCATTCGTGTTATTGGCAGTGAGCTTGTTCAGAAATATGTAGGAGAGGGTGCTCGGATGGTCCGTGAGCTTTTCCAGgcaagtcaat ... ttgtgagcagATGGCCCGTTCAAAGAAAGCGTGCATTGTGTTTTTTGATGAGGTAGATGCCATTGGAGGTGCTCGTTTCGACGATGGGTTGGGAGGTGATAACGAGGTTC




<











<


<











 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

gtggcctacttcgatgcttatcgtggtgcgatttgtttatggaacttgtgagcagATGGCCCGTTCAAAGAAAGCGTGCATTGTGTTTTTTGATGAGGTAGATGCCATTGGAGGTGCTCGTTTCGACGATGGGTTGGGAGGTGATAACGAGGTTC
                              atttgtttat  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
ccgccagtgtattgtttactcaaacgctaagtactgtgtattcacgtggcctacttcgatgcttatcgtggtgcgatttgtttatggaacttgtgagcagATGGCCCGTTCAAAGAAAGCGTGCATTGTGTTTTTTGATGAGGTAGATGCCATTGGAGGTGCTCGTTTCGACGATGGGTTGGGAGGTGATAACGAGGTTC

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  TGGAGG