1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
gtatgtttgtatcacttcacgagtgtaaactccgaaattacttgcctcatctgtttgtcggaagtatactgtacctggatttggaatgacatgaggagaattttggtctagcagtaataccaattaattggctcacgaaccggcgatgaatttgcacttcttgtgcagCTGTCTATAACCGAGGGAAGTCTTACAATATTCGGATGGACGACGATGTGCTTGTCAAGTTTTCGCCCAAGAATCCAACATCCACATATTATTTTGGTGA
species | Physcomitrella patens |
transcript | PP1S49_136V6.1 |
intron # | 7 |
splice site | 3' |
intron type | U2 |
EST: CCACAGGGTTGAGGAGGAAAGTGTTCTAGATTCTCCGCATTCACCGGCTG CTGTCTATAACCGAGGGAAGTCTTACAATATTCGGATGGACGACGATGTGC
genomic: CCACAGGGTTGAGGAGGAAAGTGTTCTAGATTCTCCGCATTCACCGGCTGgtatgtttgt ... tcttgtgcagCTGTCTATAACCGAGGGAAGTCTTACAATATTCGGATGGACGACGATGTGC
gtaataccaattaattggctcacgaaccggcgatgaatttgcacttcttgtgcagCTGTCTATAACCGAGGGAAGTCTTACAATATTCGGATGGACGACGATGTGCTTGTCAAGTTTTCGCCCAAGAATCCAACATCCACATATTATTTTGGTGA
ggctcac putative branch site (score: 3)
cacttctt putative PPT
aattaatt TA-rich tract