1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
...ttctcgcaaatctgttgtgattgggaaggagggcgatgtcaacacttgattttgttgtattatggattcttgtgatgaagctctaagctatgggttgcagGTGATGCTTCTGACTTCACTCCCTCGAGTCGAAGAGGTATAGAATTGGAGAATCCTAACACCTGTTTATCGAATTCTAATCCCAAACTGCGGATTGGAAT
species | Physcomitrella patens |
transcript | PP1S48_58V6.3 |
intron # | 7 |
splice site | 3' |
intron type | U2 |
EST: GCAGCCTGCAGCAGTTCCAGCAGAATCAATTATCGGTACAAAGAGGAAAG GTGATGCTTCTGACTTCACTCCCTCGAGTCGAAGAGGTATAGAATTGGAGAEST: gi|162162445|gb|FC339189.1|FC339189
genomic: GCAGCCTGCAGCAGTTCCAGCAGAATCAATTATCGGTACAAAGAGGAAAGgtatgtgcgc ... tgggttgcagGTGATGCTTCTGACTTCACTCCCTCGAGTCGAAGAGGTATAGAATTGGAGA
EST: ATTATCGGTACAAAGAGGAAAG GTGATGCTTCTGACTTCACTCCCTCGAGTCGAAGAGGTATAGAATTGGAGA
genomic: ATTATCGGTACAAAGAGGAAAGgtatgtgcgc ... tgggttgcagGTGATGCTTCTGACTTCACTCCCTCGAGTCGAAGAGGTATAGAATTGGAGA
ttgattttgttgtattatggattcttgtgatgaagctctaagctatgggttgcagGTGATGCTTCTGACTTCACTCCCTCGAGTCGAAGAGGTATAGAATTGGAGAATCCTAACACCTGTTTATCGAATTCTAATCCCAAACTGCGGATTGGAAT
acttgat putative branch site (score: 5)
ttgtattat TA-rich tract