1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
gtatgaactttctacaagcaattatgttcaacactttgcacagatttgtcccgattagggttaccaaccacctgtgagttttgccttttcaaactctaatttcttcgccgtatgagtgggttttcatatgcagGCTTACACTCAAATTCACGACTGGGCCATTCCCAAGCTCTACTGGGAAGATGTCAAATGCTTCGTTTACACCTCTACAATTCCAACCACTTTGAATCAAG
species | Physcomitrella patens |
transcript | PP1S47_321V6.2 |
intron # | 7 |
splice site | 3' |
intron type | U2 |
EST: ACATTGTTGTGTCAGCTCCCACTGCCAGTGAACTTCTCGACAAACTGGAG GCTTACACTCAAATTCACGACTGGGCCATTCCCAAGCTCTACTGGGAAGATEST: gi|67700100|gb|BJ960333.1|BJ960333
genomic: ACATTGTTGTGTCAGCTCCCACTGCCAGTGAACTTCTCGACAAACTGGAGgtatgaactt ... tcatatgcagGCTTACACTCAAATTCACGACTGGGCCATTCCCAAGCTCTACTGGGAAGAT
EST: ACATTGTTGTGTCAGCTCCCACTGCCAGTGAACTTCTCGACAAACTGGAG GCTTACACTCAAATTCACGACTGGGCCATTCCCAAGCTCTACTGGGAAGAT
genomic: ACATTGTTGTGTCAGCTCCCACTGCCAGTGAACTTCTCGACAAACTGGAGgtatgaactt ... tcatatgcagGCTTACACTCAAATTCACGACTGGGCCATTCCCAAGCTCTACTGGGAAGAT
ttttgccttttcaaactctaatttcttcgccgtatgagtgggttttcatatgcagGCTTACACTCAAATTCACGACTGGGCCATTCCCAAGCTCTACTGGGAAGATGTCAAATGCTTCGTTTACACCTCTACAATTCCAACCACTTTGAATCAAG
ctctaat putative branch site (score: 3)
ttttcat putative PPT
taatttctt TA-rich tract