1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' |
...ggatattatacacagtaactgtgagtgggaggtcattcgattattgcacgtaaagattggccgttgtgatgtatgttgacaatgaatttcgtgtatgcagATAACTGATACCGACCATATTGATCGTCTGATGTCGTGCTTGAATATGGCTCTTCCTTTCTATGCT
species | Physcomitrella patens |
transcript | PP1S47_196V6.1 |
intron # | 7 |
splice site | 3' |
intron type | U2 |
EST: AGCTATTGGAAATTGTTGAAGGTCAGGCTGATTTGGATGCTGTCTTCAAT ATAACTGATACCGACCATATTGATCGTCTGATGTCGTGCTTGAATATGGCTEST: gi|162186312|gb|FC361620.1|FC361620
genomic: AGCTATTGGAAATTGTTGAAGGTCAGGCTGATTTGGATGCTGTCTTCAATgtgagtattt ... gtgtatgcagATAACTGATACCGACCATATTGATCGTCTGATGTCGTGCTTGAATATGGCT
EST: AGCTATTGGAAATTGTTGAAGGTCAGGCTGATTTGGATGCTGTCTTCAAT ATAACTGATACCGACCATATTGATCGTCTGATGTCGTGCTTGAATATGGCT
genomic: AGCTATTGGAAATTGTTGAAGGTCAGGCTGATTTGGATGCTGTCTTCAATgtgagtattt ... gtgtatgcagATAACTGATACCGACCATATTGATCGTCTGATGTCGTGCTTGAATATGGCT
gcacgtaaagattggccgttgtgatgtatgttgacaatgaatttcgtgtatgcagATAACTGATACCGACCATATTGATCGTCTGATGTCGTGCTTGAATATGGCTCTTCCTTTCTATGCT
tgttgac putative branch site (score: 3)
aatgaattt TA-rich tract