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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...tgcacactgatgtgtttgcttgatttctgaatttttggggtttttttggtgggggctgctctgatctgcatgcatctattaatgtcggtgaaatgtgcagGCATCAAATCCAGGAAAACATTTCAAGCGGGTGCCGAAAACAAGCGAAATTAAGCTTATTGACTTTGGTAGCGCGACCTTTGACAGCCACTACCACTGTT

Basic information

species Physcomitrella patens
transcript PP1S425_6V6.2
intron # 7
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

ttggtgggggctgctctgatctgcatgcatctattaatgtcggtgaaatgtgcagGCATCAAATCCAGGAAAACATTTCAAGCGGGTGCCGAAAACAAGCGAAATTAAGCTTATTGACTTTGGTAGCGCGACCTTTGACAGCCACTACCACTGTT
                               tattaat  putative branch site (score: 2)
                            atctattaat  TA-rich tract