1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
...atttctcgatgtctttgatgttgatgttcgtgctcaccatctagcagtggttgaactggtttgcgtaacttacgaatagcacatacctggtaatatgcagGTCCTCCAAGCAGTGCTTGAGAAGTATGACATCCAGCCTGATTCCTTTGCAGCAGTGTGTGTAATCGTTGATAAG
species | Physcomitrella patens |
transcript | PP1S407_7V6.3 |
intron # | 7 |
splice site | 3' |
intron type | U2 |
EST: AACTCAACATTACGTCTGATGACGTTGGGATCAAAGTTTCAAACCGAAAG GTCCTCCAAGCAGTGCTTGAGAAGTATGACATCCAGCCTGATTCCTTTGCAEST: gi|208379607|gb|DC927104.1|DC927104
genomic: AACTCAACATTACGTCTGATGACGTTGGGATCAAAGTTTCAAACCGAAAGgtctcttctt ... taatatgcagGTCCTCCAAGCAGTGCTTGAGAAGTATGACATCCAGCCTGATTCCTTTGCA
EST: ACTCAACATTACCGTCTGATGACGTTGGGATCAAAGTTTCAAACCGAAAG GTCCTCCAAGCAGTGCTTGAGAAGTATGACATCCAGCCTGATTCCTTTGCAEST: gi|67726712|gb|BJ976971.1|BJ976971
genomic: ACTCAACATTA-CGTCTGATGACGTTGGGATCAAAGTTTCAAACCGAAAGgtctcttctt ... taatatgcagGTCCTCCAAGCAGTGCTTGAGAAGTATGACATCCAGCCTGATTCCTTTGCA
EST: CTGATGACGTTGGGATCAAAGTTTCAAACCGAAAG GTCCTCCAAGCAGTGCTTGAGAAGTATGACATCCAGCCTGATTCCTTTGCAEST: gi|208354688|gb|DC934180.1|DC934180
genomic: CTGATGACGTTGGGATCAAAGTTTCAAACCGAAAGgtctcttctt ... taatatgcagGTCCTCCAAGCAGTGCTTGAGAAGTATGACATCCAGCCTGATTCCTTTGCA
EST: AACTCAACATTACGTCTGATGACGTTGGGATCAAAGTTTCAAACCGAAAG GTCCTCCAAGCAGTGCTTGAGAAGTATGACATCCAGCCTGATNCCTTNGCAEST: gi|208346695|gb|DC913341.1|DC913341
genomic: AACTCAACATTACGTCTGATGACGTTGGGATCAAAGTTTCAAACCGAAAGgtctcttctt ... taatatgcagGTCCTCCAAGCAGTGCTTGAGAAGTATGACATCCAGCCTGATTCCTTTGCA
EST: AACTCAACATTACGTCTGATGACGTTGGGATCAAAGTTTCAAACCGAAAG GTCCTCCAAGCAGTGCTTGAGAAGTATGACATCCAGCCTGATTCCTTTGCAEST: gi|100362562|gb|BY947415.1|BY947415
genomic: AACTCAACATTACGTCTGATGACGTTGGGATCAAAGTTTCAAACCGAAAGgtctcttctt ... taatatgcagGTCCTCCAAGCAGTGCTTGAGAAGTATGACATCCAGCCTGATTCCTTTGCA
EST: AACTCAACATTACGTCTGATGACGTTGGGATCAAAGTTTCNAACCGAAAG GTCCTCCNAGCAGTGCTTGAGAAGTATGACATCCAGCCTGATTCCTTTGCA
genomic: AACTCAACATTACGTCTGATGACGTTGGGATCAAAGTTTCAAACCGAAAGgtctcttctt ... taatatgcagGTCCTCCAAGCAGTGCTTGAGAAGTATGACATCCAGCCTGATTCCTTTGCA
agtggttgaactggtttgcgtaacttacgaatagcacatacctggtaatatgcagGTCCTCCAAGCAGTGCTTGAGAAGTATGACATCCAGCCTGATTCCTTTGCAGCAGTGTGTGTAATCGTTGATAAG
aacttac putative branch site (score: 2)
taatat TA-rich tract