1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
gtacgacatttttctcatactgctttcttgtttatgatgattactttgttctctattcagcgtctctttgttcagagctaagtccttccgattttatgtttgagggcttcagacttgaagtgctattcgcgttcactaacttgaatttgctgcatgcagGTACTATTGTTTCTGTTACGGCTGTTGGACTTGGTCTCCTCCGCATTCTAATTTGAGTGCAAGCAGAGTACTATACCCCAAGTTCCTTGCTGAGTGTACT
species | Physcomitrella patens |
transcript | PP1S34_228V6.1 |
intron # | 7 |
splice site | 3' |
intron type | U2 |
EST: GAAAACACAACTTGAAGCAGCCAAGTACGACGTCATTAAGTATTGCATTG GTACTATTGTTTCTGTTACGGCTGTTGGACTTGGTCTCCTCCGCATTCTAAEST: gi|208386160|gb|DC949071.1|DC949071
genomic: GAAAACACAACTTGAAGCAGCCAAGTACGACGTCATTAAGTATTGCATTGgtacgacatt ... ctgcatgcagGTACTATTGTTTCTGTTACGGCTGTTGGACTTGGTCTCCTCCGCATTCTAA
EST: GAAAACACAACTTGAAGCAGCCAAGTACGACGTCATTAAGTATTGCATTG GTACTATTGTTTCTGTTACGGCTGTTGGACTTGGTCTCCTCCGCATTCTAAEST: gi|208353536|gb|DC918508.1|DC918508
genomic: GAAAACACAACTTGAAGCAGCCAAGTACGACGTCATTAAGTATTGCATTGgtacgacatt ... ctgcatgcagGTACTATTGTTTCTGTTACGGCTGTTGGACTTGGTCTCCTCCGCATTCTAA
EST: GAAAACACAACTTGAAGCAGCCAAGTACGACGTCATTAAGTATTGCATTG GTACTATTGTTTCTGTTACGGCTGTTGGACTTGGTCTCCTCCGCATTCTAAEST: gi|18335675|gb|BJ167695.1|BJ167695
genomic: GAAAACACAACTTGAAGCAGCCAAGTACGACGTCATTAAGTATTGCATTGgtacgacatt ... ctgcatgcagGTACTATTGTTTCTGTTACGGCTGTTGGACTTGGTCTCCTCCGCATTCTAA
EST: GAAAACACAACTTGAAGCAGCCAAGTACGACGTCATTAAGTATTGCATTG GTACTATTGTTTCTGTTACGGCTGTTGGACTTGGTCTCCTCCGCATTCTAAEST: gi|208356048|gb|DC957292.1|DC957292
genomic: GAAAACACAACTTGAAGCAGCCAAGTACGACGTCATTAAGTATTGCATTGgtacgacatt ... ctgcatgcagGTACTATTGTTTCTGTTACGGCTGTTGGACTTGGTCTCCTCCGCATTCTAA
EST: GAAAACACAACTTGAAGCAGCCAAGTACGACGTCATTAAGTATTGCATTG GTACTATTGTTTCTGTTACGGCTGTTGGACTTGGTCTCCTCCGCATTCTAA
genomic: GAAAACACAACTTGAAGCAGCCAAGTACGACGTCATTAAGTATTGCATTGgtacgacatt ... ctgcatgcagGTACTATTGTTTCTGTTACGGCTGTTGGACTTGGTCTCCTCCGCATTCTAA
ggcttcagacttgaagtgctattcgcgttcactaacttgaatttgctgcatgcagGTACTATTGTTTCTGTTACGGCTGTTGGACTTGGTCTCCTCCGCATTCTAATTTGAGTGCAAGCAGAGTACTATACCCCAAGTTCCTTGCTGAGTGTACT
cactaac putative branch site (score: 1)
ttgaattt TA-rich tract