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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtgagtagtgatggatttcatgtagtaacgacacagaagaccttttgttggggggggggggggatcagttgattaattctgatctctactgattttgattgtgttattacgttggaaaggtctttaattatatgatgccactgtcaccctgcctctcgacagGTTGGTTCAGAAATTGTGAGGCGGGCTTTGAGTTACCCTTTGAAGTTGATCGCCAAAAATGCCGGTGTGAATGGAAGCGTCGTAGTTGAGAAG

Basic information

species Physcomitrella patens
transcript PP1S276_75V6.1
intron # 7
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: PP1S276_75V6.1 (Physcomitrella patens), 3'ss of exon 7
lower sequence: Vv06s0004g00240.t01 (Vitis vinifera), 3'ss of exon 11
--gtgagtagtga-tggatttcatgtagtaacgacacagaagaccttttgttggggggggggggggatcagttgattaattctgatctctactgattttgattgtgttattacgttggaaaggtctttaattatatgatgccactgtcaccctgc-ctctcgacagGTTGGTTCAGAAATTGTGAGGCGGGCTTTGAGTTACCCTTTGAAGTTGATCGCCAAAAATGCCGGTGTGAATGGAAGCGTCGTAGTTGAGAAG
  |  | | |||  ||  ||  || | | |      ||  | |||||  |||  ||          ||   |||| | || ||||     |    ||   | ||||| | ||  ||||  |||   |    | |||  |   |  ||   | ||   |     ||||||||  | || ||||| | | | ||||||||||||||| ||||||| || ||||||||||| ||||| |||||||| || ||   |||||||
gtgatacttgtggctgtgttcaatatgggatttgtcca--ataccttgagttttggttttccca--atagtttgaatcatgctga-----atgtgttcaaaatgtgtcaatatattggccaggatatagtgtttatcctcttaaagtggacttgaattgattgcagGTTGGAGCTGATATTGTCAAGAGAGCTTTGAGTTACCCTCTGAAGTTAATTGCCAAAAATGCTGGTGTTAATGGAAGTGTGGTCAGTGAGAAG
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|162178480|gb|FC354204.1|FC354204
EST:     CTAGCCAAGTGGATGCTATCAAAGATACTCTGGACAACGATGAGCAGAAG                         GTTGGTTCAGAAATTGTGAGGCGGGCTTTGAGTTACCCTTTGAAGTTGATC
genomic: CTAGCCAAGTGGATGCTATCAAAGATACTCTGGACAACGATGAGCAGAAGgtgagtagtg ... ctctcgacagGTTGGTTCAGAAATTGTGAGGCGGGCTTTGAGTTACCCTTTGAAGTTGATC
EST: gi|37847188|gb|BJ605196.1|BJ605196
EST:     CTAGCCAAGTGGATGCTATCAAAGATACTCTGGACAACGATGAGCAGAAG                         GTTGGTTCAGAAATTGTGAGGCGGGCTTTGAGTTACCCTTTGAAGTTGATC
genomic: CTAGCCAAGTGGATGCTATCAAAGATACTCTGGACAACGATGAGCAGAAGgtgagtagtg ... ctctcgacagGTTGGTTCAGAAATTGTGAGGCGGGCTTTGAGTTACCCTTTGAAGTTGATC
EST: gi|162176319|gb|FC353504.1|FC353504
EST:     CTAGCCAAGTGGATGCTATCAAAGATACTCTGGACAACGATGAGCAGAAG                         GTTGGTTCAGAAATTGTGAGGCGGGCTTTGAGTTACCCTTTGAAGTTGATC
genomic: CTAGCCAAGTGGATGCTATCAAAGATACTCTGGACAACGATGAGCAGAAGgtgagtagtg ... ctctcgacagGTTGGTTCAGAAATTGTGAGGCGGGCTTTGAGTTACCCTTTGAAGTTGATC
EST: gi|162270365|gb|FC447065.1|FC447065
EST:     GACAACGATGAGCAGAAG                         GTTGGTTCAGAAATTGTGAGGCGGGCTTTGAGTTACCCTTTGAAGTTGATC
genomic: GACAACGATGAGCAGAAGgtgagtagtg ... ctctcgacagGTTGGTTCAGAAATTGTGAGGCGGGCTTTGAGTTACCCTTTGAAGTTGATC
EST: gi|162170396|gb|FC346788.1|FC346788
EST:     CTAGCCAAGTGGATGCTATCAAAGATACTCTGGACAACGATGAGCAGAAG                         GTTGGTTCAGAAATTGTGAGGCGGGCTTTGAGTTACCCTTTGAAGTTGATC
genomic: CTAGCCAAGTGGATGCTATCAAAGATACTCTGGACAACGATGAGCAGAAGgtgagtagtg ... ctctcgacagGTTGGTTCAGAAATTGTGAGGCGGGCTTTGAGTTACCCTTTGAAGTTGATC
EST: gi|162157273|gb|FC332907.1|FC332907
EST:     GCTATCAAAGATACTCTGGACAACGATGAGCAGAAG                         GTTGGTTCAGAAATTGTGAGGCGGGCTNTGAGTTACCCTTTGAAGTTGATC
genomic: GCTATCAAAGATACTCTGGACAACGATGAGCAGAAGgtgagtagtg ... ctctcgacagGTTGGTTCAGAAATTGTGAGGCGGGCTTTGAGTTACCCTTTGAAGTTGATC
EST: gi|162178479|gb|FC354203.1|FC354203
EST:     CTAGCCAAGTGGATGCTATCAAAGATACTCTGGACAACGATGAGCAGAAG                         GTTGGTTCAGAAATTGTGAGGCGGGCTCTGAGTTACCCTTTGAAGTTGATC
genomic: CTAGCCAAGTGGATGCTATCAAAGATACTCTGGACAACGATGAGCAGAAGgtgagtagtg ... ctctcgacagGTTGGTTCAGAAATTGTGAGGCGGGCTTTGAGTTACCCTTTGAAGTTGATC
EST: gi|67692782|gb|BJ953015.1|BJ953015
EST:     CTAGCCAAGTGGATGCTATCAAAGATACTCTGGACAACGATGAGCAGAAG                         GTTGGTTCAGAAATTGTGAGGCGGGCTTTGAGTTACCCTTTGAAGTTGATC
genomic: CTAGCCAAGTGGATGCTATCAAAGATACTCTGGACAACGATGAGCAGAAGgtgagtagtg ... ctctcgacagGTTGGTTCAGAAATTGTGAGGCGGGCTTTGAGTTACCCTTTGAAGTTGATC
EST: gi|162169599|gb|FC345539.1|FC345539
EST:     CTAGCCAAGTGGATGCTATCAAAGATACTCTGGACAACGATGAGCAGAAG                         GTTGGTTCAGAAATTGTGAGGCGGGCTTTGAGTTACCCTTTGAAGTTGATC
genomic: CTAGCCAAGTGGATGCTATCAAAGATACTCTGGACAACGATGAGCAGAAGgtgagtagtg ... ctctcgacagGTTGGTTCAGAAATTGTGAGGCGGGCTTTGAGTTACCCTTTGAAGTTGATC
EST: gi|67571361|gb|BJ944185.1|BJ944185
EST:     CTAGCCAAGTGGATGCTATCAAAGATACTCTGGACAACGATGAGCAGAAG                         GTTGGTTCAGAAATTGTGAGGCGGGCTTTGAGTTACCCTTTTGAAGTTGAT
genomic: CTAGCCAAGTGGATGCTATCAAAGATACTCTGGACAACGATGAGCAGAAGgtgagtagtg ... ctctcgacagGTTGGTTCAGAAATTGTGAGGCGGGCTTTGAGTTACCCTTT-GAAGTTGAT
EST: gi|37828443|gb|BJ586455.1|BJ586455
EST:     CTAGCCAAGTGGATGCTATCAAAGATACTCTGGACAACGATGAGCAGAAG                         GTTGGTTCAGAAATTGTGAGGCGGGCTTTGAGTTACCCTTTGAAGTTGATC
genomic: CTAGCCAAGTGGATGCTATCAAAGATACTCTGGACAACGATGAGCAGAAGgtgagtagtg ... ctctcgacagGTTGGTTCAGAAATTGTGAGGCGGGCTTTGAGTTACCCTTTGAAGTTGATC
EST: gi|37822400|gb|BJ580466.1|BJ580466
EST:     CTAGCCAAGTGGATGCTATCAAAGATACTCTGGACAACGATGAGCAGAAG                         GTTGGTTCAGAAATTGTGAGGCGGGCTTTGAGTTACCCTTTGAAGTTGATC
genomic: CTAGCCAAGTGGATGCTATCAAAGATACTCTGGACAACGATGAGCAGAAGgtgagtagtg ... ctctcgacagGTTGGTTCAGAAATTGTGAGGCGGGCTTTGAGTTACCCTTTGAAGTTGATC
EST: gi|162169794|gb|FC346150.1|FC346150
EST:     CTAGCCAAGTGGATGCTATCAAAGATACTCTGGACAACGATGAGCAGAAG                         GTTGGTTCAGAAATTGTGAGGCGGGCTTTGAGTTACCCTTTGAAGTTGATC
genomic: CTAGCCAAGTGGATGCTATCAAAGATACTCTGGACAACGATGAGCAGAAGgtgagtagtg ... ctctcgacagGTTGGTTCAGAAATTGTGAGGCGGGCTTTGAGTTACCCTTTGAAGTTGATC
EST: gi|162192274|gb|FC367799.1|FC367799
EST:     CTAGCCAAGTGGATGCTATCAAAGATACTCTGGACAACGATGAGCAGAAG                         GTTGGTTCAGAAATTGTGAGGCGGGCTTTGAGTTACCCTTTGAAGTTGATC
genomic: CTAGCCAAGTGGATGCTATCAAAGATACTCTGGACAACGATGAGCAGAAGgtgagtagtg ... ctctcgacagGTTGGTTCAGAAATTGTGAGGCGGGCTTTGAGTTACCCTTTGAAGTTGATC
EST: gi|162176318|gb|FC353503.1|FC353503
EST:     ACAACGATGAGCAGAAG                         G-TGGTTTCAGAAATTGTGAGGCGGGCTNTGAGTTACCCTTTGAAGTTGAT
genomic: ACAACGATGAGCAGAAGgtgagtagtg ... ctctcgacagGTTGG-TTCAGAAATTGTGAGGCGGGCTTTGAGTTACCCTTTGAAGTTGAT
EST: gi|37823462|gb|BJ581528.1|BJ581528
EST:     TAGCCAAGTGGATGCTATCAAAGATACTCTGGACAACGATGAGCCAGAAG                         GTTGGTTCAGAAATTGTGAGGCGGGCTTTGAGTTACCCTTTGAAGTTGAT
genomic: TAGCCAAGTGGATGCTATCAAAGATACTCTGGACAACGATGAG-CAGAAGgtgagtagtg ... ctctcgacagGTTGGTTCAGAAATTGTGAGGCGGGCTTTGAGTTACCCTTTGAAGTTGAT
EST: gi|162170395|gb|FC346787.1|FC346787
EST:     CTAGCCAAGTGGATGCTATCAAAGATACTCTGGACAACGATGAGCAGAAG                         GTTGGTTCAGAAATTGTGAGGCGGGCTTTGAGTTACCCTTTGAAGTTGATC
genomic: CTAGCCAAGTGGATGCTATCAAAGATACTCTGGACAACGATGAGCAGAAGgtgagtagtg ... ctctcgacagGTTGGTTCAGAAATTGTGAGGCGGGCTTTGAGTTACCCTTTGAAGTTGATC
EST: gi|162179963|gb|FC356034.1|FC356034
EST:     CTAGCCAAGTGGATGCTATCAAAGATACTCTGGACAACGATGAGCAGAAG                         GTTGGTTCAGAAATTGTGAGGCGGGCTTTGAGTTACCCTTTGAAGTTGATC
genomic: CTAGCCAAGTGGATGCTATCAAAGATACTCTGGACAACGATGAGCAGAAGgtgagtagtg ... ctctcgacagGTTGGTTCAGAAATTGTGAGGCGGGCTTTGAGTTACCCTTTGAAGTTGATC
EST: gi|162191286|gb|FC366860.1|FC366860
EST:     CTAGCCAAGTGGATGCTATCAAAGATACTCTGGACAACGATGAGCAGAAG                         GTTGGTTCAGAAATTGTGAGGCGGGCTTTGAGTTACCCTTTGAAGTTGATC
genomic: CTAGCCAAGTGGATGCTATCAAAGATACTCTGGACAACGATGAGCAGAAGgtgagtagtg ... ctctcgacagGTTGGTTCAGAAATTGTGAGGCGGGCTTTGAGTTACCCTTTGAAGTTGATC
EST: gi|162191910|gb|FC366915.1|FC366915
EST:     CTAGCCAAGTGGATGCTATCAAAGATACTCTGGACAACGATGAGCAGAAG                         GTTGGTTCAGAAATTGTGAGGCGGGCTTTGAGTTACCCTTTGAAGTTGATC
genomic: CTAGCCAAGTGGATGCTATCAAAGATACTCTGGACAACGATGAGCAGAAGgtgagtagtg ... ctctcgacagGTTGGTTCAGAAATTGTGAGGCGGGCTTTGAGTTACCCTTTGAAGTTGATC
EST: gi|37823879|gb|BJ581945.1|BJ581945
EST:     CTAGCCAAGTGGATGCTATCAAAGATACTCTGGACAACGATGAGCAGAAG                         GTTGGTTCAGAAATTGTGAGGCGGGCTTTGAGTTACCCTTTGAAGTTGATC
genomic: CTAGCCAAGTGGATGCTATCAAAGATACTCTGGACAACGATGAGCAGAAGgtgagtagtg ... ctctcgacagGTTGGTTCAGAAATTGTGAGGCGGGCTTTGAGTTACCCTTTGAAGTTGATC
EST: gi|162153112|gb|FC329518.1|FC329518
EST:     CTAGCCAAGTGGATGCTATCAAAGATACTCTGGACAACGATGAGCAGAAG                         GTTGGTTCAGAAATTGTGAGGCGGGCTTTGAGTTACCCTTTGAAGTTGATC
genomic: CTAGCCAAGTGGATGCTATCAAAGATACTCTGGACAACGATGAGCAGAAGgtgagtagtg ... ctctcgacagGTTGGTTCAGAAATTGTGAGGCGGGCTTTGAGTTACCCTTTGAAGTTGATC
EST: gi|162186624|gb|FC363596.1|FC363596
EST:     CTAGCCAAGTGGATGCTATCAAAGATACTCTGGACAACGATGAGCAGAAG                         GTTGGTTCAGAAATTGTGAGGCGGGCTNTGAGTTACCCTTTGAAGTTGATC
genomic: CTAGCCAAGTGGATGCTATCAAAGATACTCTGGACAACGATGAGCAGAAGgtgagtagtg ... ctctcgacagGTTGGTTCAGAAATTGTGAGGCGGGCTTTGAGTTACCCTTTGAAGTTGATC
EST: gi|162185157|gb|FC362291.1|FC362291
EST:     GGACAACGATGAGCAGAAG                         GTTGGTTCAGAAATTGTGAGGCGGGCTTTGAGTTACCCTTTGAAGTTGATC
genomic: GGACAACGATGAGCAGAAGgtgagtagtg ... ctctcgacagGTTGGTTCAGAAATTGTGAGGCGGGCTTTGAGTTACCCTTTGAAGTTGATC
EST: gi|162169600|gb|FC345540.1|FC345540
EST:     CTAGCCAAGTGGATGCTATCAAAGATACTCTGGACAACGATGAGCAGAAG                         GTTGGTTCAGAAATTGTGAGGCGGGCTTTGAGTTACCCTTTGAAGTTGATC
genomic: CTAGCCAAGTGGATGCTATCAAAGATACTCTGGACAACGATGAGCAGAAGgtgagtagtg ... ctctcgacagGTTGGTTCAGAAATTGTGAGGCGGGCTTTGAGTTACCCTTTGAAGTTGATC
EST: gi|162192275|gb|FC367800.1|FC367800
EST:     CTAGCCAAGTGGATGCTATCAAAGATACTCTGGACAACGATGAGCAGAAG                         GTTGGTTCAGAAATTGTGAGGCGGGCTTTGAGTTACCCTTTGAAGTTGATC
genomic: CTAGCCAAGTGGATGCTATCAAAGATACTCTGGACAACGATGAGCAGAAGgtgagtagtg ... ctctcgacagGTTGGTTCAGAAATTGTGAGGCGGGCTTTGAGTTACCCTTTGAAGTTGATC
EST: gi|208395400|gb|DC924468.1|DC924468
EST:     CTAGCCAAGTGGATGCTATCAAAGATACTCTGGACAACGATGAGCAGAAG                         GTTGGTTCAGAAATTGTGAGGCGGGCTTTGAGTTACCCTTTGAAGTTGATC
genomic: CTAGCCAAGTGGATGCTATCAAAGATACTCTGGACAACGATGAGCAGAAGgtgagtagtg ... ctctcgacagGTTGGTTCAGAAATTGTGAGGCGGGCTTTGAGTTACCCTTTGAAGTTGATC
EST: gi|162187014|gb|FC363420.1|FC363420
EST:     CTAGCCAAGTGGATGCTATCAAAGATACTCTGGACANCGATGAGCAGAAG                         GTTGGTTCAGAAATTGTGAGGCGGGCTTTGAGTTACCCTTTGAAGTTGATC
genomic: CTAGCCAAGTGGATGCTATCAAAGATACTCTGGACAACGATGAGCAGAAGgtgagtagtg ... ctctcgacagGTTGGTTCAGAAATTGTGAGGCGGGCTTTGAGTTACCCTTTGAAGTTGATC
EST: gi|162160105|gb|FC335975.1|FC335975
EST:     CTAGCCAAGTGGATGCTATCAAAGATACTCTGGACAACGATGAGCAGAAG                         GTTGGTTCAGAAATTGTGAGGCGGGCTTTGAGTTACCCTTTGAAGTTGATC
genomic: CTAGCCAAGTGGATGCTATCAAAGATACTCTGGACAACGATGAGCAGAAGgtgagtagtg ... ctctcgacagGTTGGTTCAGAAATTGTGAGGCGGGCTTTGAGTTACCCTTTGAAGTTGATC
EST: gi|67694684|gb|BJ954917.1|BJ954917
EST:     CTAGCCAAGTGGATGCTATCAAAGATACTCTGGACAACGATGAGCAGAAG                         GTTGGTTCAGAAATTGTGAGGCGGGCTTTGAGTTACCCTTTGAAGTTGATC
genomic: CTAGCCAAGTGGATGCTATCAAAGATACTCTGGACAACGATGAGCAGAAGgtgagtagtg ... ctctcgacagGTTGGTTCAGAAATTGTGAGGCGGGCTTTGAGTTACCCTTTGAAGTTGATC
EST: gi|162190349|gb|FC365363.1|FC365363
EST:     CTAGCCAAGTGGATGCTATCAAAGATACTCTGGACAACGATGAGCAGAAG                         GTTGGTTCAGAAATTGTGAGGCGGGCTTTGAGTTACCCTTTGAAGTTGATC
genomic: CTAGCCAAGTGGATGCTATCAAAGATACTCTGGACAACGATGAGCAGAAGgtgagtagtg ... ctctcgacagGTTGGTTCAGAAATTGTGAGGCGGGCTTTGAGTTACCCTTTGAAGTTGATC
EST: gi|162190350|gb|FC365364.1|FC365364
EST:     CTAGCCAAGTGGATGCTATCAAAGATACTCTGGACAACGATGAGCAGAAG                         GTTGGTTCAGAAATTGTGAGGCGGGCTTTGAGTTACCCTTTGAAGTTGATC
genomic: CTAGCCAAGTGGATGCTATCAAAGATACTCTGGACAACGATGAGCAGAAGgtgagtagtg ... ctctcgacagGTTGGTTCAGAAATTGTGAGGCGGGCTTTGAGTTACCCTTTGAAGTTGATC
EST: gi|162150108|gb|FC326821.1|FC326821
EST:     CTAGCCAAGTGGATGCTATCAAAGATACTCTGGACAACGATGAGCAGAAG                         GTTGGTTCAGAAATTGTGAGGCGGGCTTTGAGTTACCCTTTGAAGTTGATC
genomic: CTAGCCAAGTGGATGCTATCAAAGATACTCTGGACAACGATGAGCAGAAGgtgagtagtg ... ctctcgacagGTTGGTTCAGAAATTGTGAGGCGGGCTTTGAGTTACCCTTTGAAGTTGATC
EST: gi|37835833|gb|BJ593845.1|BJ593845
EST:     CTAGCCAAGTGGATGCTATCAAAGATACTCTGGACAACGATGAGCAGAAG                         GTTGGTTCAGAAATTGTGAGGCGGGCTTTGAGTTACCCTTTGAAGTTGATC
genomic: CTAGCCAAGTGGATGCTATCAAAGATACTCTGGACAACGATGAGCAGAAGgtgagtagtg ... ctctcgacagGTTGGTTCAGAAATTGTGAGGCGGGCTTTGAGTTACCCTTTGAAGTTGATC
EST: gi|162150107|gb|FC326820.1|FC326820
EST:     CTAGCCAAGTGGATGCTATCAAAGATACTCTGGACAACGATGAGCAGAAG                         GTTGGTTCAGAAATTGTGAGGCGGGCTTTGAGTTACCCTTTGAAGTTGATC
genomic: CTAGCCAAGTGGATGCTATCAAAGATACTCTGGACAACGATGAGCAGAAGgtgagtagtg ... ctctcgacagGTTGGTTCAGAAATTGTGAGGCGGGCTTTGAGTTACCCTTTGAAGTTGATC
EST: gi|37850696|gb|BJ608704.1|BJ608704
EST:     CTAGCCAAGTGGATGCTATCAAAGATACTCTGGACAACGATGAGCAGAAG                         GTTGGTTCAGAAATTGTGAGGCGGGCTTTGAGTTACCCTTTGAAGTTGATC
genomic: CTAGCCAAGTGGATGCTATCAAAGATACTCTGGACAACGATGAGCAGAAGgtgagtagtg ... ctctcgacagGTTGGTTCAGAAATTGTGAGGCGGGCTTTGAGTTACCCTTTGAAGTTGATC

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 32 (upstream exon), 23 (downstream exon)
Score: 2

TGTGGAGGAAGGCATCGTCGTGGGTGGAGGATGCACCTTATTGAGATTGGCTAGCCAAGTGGATGCTATCAAAGATACTCTGGACAACGATGAGCAGAAGgtgagtagtg ... ctctcgacagGTTGGTTCAGAAATTGTGAGGCGGGCTTTGAGTTACCCTTTGAAGTTGATCGCCAAAAATGCCGGTGTGAATGGAAGCGTCGTAGTTGAGAAG




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 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tacgttggaaaggtctttaattatatgatgccactgtcaccctgcctctcgacagGTTGGTTCAGAAATTGTGAGGCGGGCTTTGAGTTACCCTTTGAAGTTGATCGCCAAAAATGCCGGTGTGAATGGAAGCGTCGTAGTTGAGAAG
              ctttaat  putative branch site (score: 2)
                                    tcaccctgcctctc  putative PPT
             tctttaattatatgat  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
gtgagtagtgatggatttcatgtagtaacgacacagaagaccttttgttggggggggggggggatcagttgattaattctgatctctactgattttgattgtgttattacgttggaaaggtctttaattatatgatgccactgtcaccctgcctctcgacagGTTGGTTCAGAAATTGTGAGGCGGGCTTTGAGTTACCCTTTGAAGTTGATCGCCAAAAATGCCGGTGTGAATGGAAGCGTCGTAGTTGAGAAG

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  TGGAAG