1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
gtacaaatcattgatcatggccaaccatttcttgtgaagggatttatgaactattgggaagagagagtaacagtagctgagcttggcaccatatgggagttcttgcgatgacatcctctgacttggattattttttgcagGAATTTGATAATGATTCGGGATCCAGTCAAGTGTTTTGGCTGCTGAAGGAAAGTGAATTGACACCTAGCAGCGCTAACATCCTTGACGGCCGTTACACAG
species | Physcomitrella patens |
transcript | PP1S211_59V6.1 |
intron # | 7 |
splice site | 3' |
intron type | U2 |
EST: CTACGACACTGCCATTCAACGCATTCGGCACCATGGCAATGGCACGGGAG GAATTTGATAATGATTCGGGATCCAGTCAAGTGTTTTGGCTGCTGAAGGAAEST: gi|208362039|gb|DC950488.1|DC950488
genomic: CTACGACACTGCCATTCAACGCATTCGGCACCATGGCAATGGCACGGGAGgtacaaatca ... ttttttgcagGAATTTGATAATGATTCGGGATCCAGTCAAGTGTTTTGGCTGCTGAAGGAA
EST: CTACGACACTGCCATTCAACGCATTCGGCACCATGGCAATGGCACGGGAG GAATTTGATAATGATTCGGGATCCAGTCAAGTGTTTTGGCTGCTGAAGGAAEST: gi|37839667|gb|BJ597675.1|BJ597675
genomic: CTACGACACTGCCATTCAACGCATTCGGCACCATGGCAATGGCACGGGAGgtacaaatca ... ttttttgcagGAATTTGATAATGATTCGGGATCCAGTCAAGTGTTTTGGCTGCTGAAGGAA
EST: CTACGACACTGCCATTCAACGCATTCGGCACCATGGCAATGGCACGGGAG GGATTTGATAATGATTCGGGATCCAGTCAAGTGTTTTGGCTGCTGAAGGAAEST: gi|37839827|gb|BJ597835.1|BJ597835
genomic: CTACGACACTGCCATTCAACGCATTCGGCACCATGGCAATGGCACGGGAGgtacaaatca ... ttttttgcagGAATTTGATAATGATTCGGGATCCAGTCAAGTGTTTTGGCTGCTGAAGGAA
EST: CTACGACACTGCCATTCAACGCATTCGGCACCATGGCAATGGCACGGGAG GAATTTGATAATGATTCGGGATCCAGTCAAGTGTTTTGGCTGCTGAAGGAA
genomic: CTACGACACTGCCATTCAACGCATTCGGCACCATGGCAATGGCACGGGAGgtacaaatca ... ttttttgcagGAATTTGATAATGATTCGGGATCCAGTCAAGTGTTTTGGCTGCTGAAGGAA
gcaccatatgggagttcttgcgatgacatcctctgacttggattattttttgcagGAATTTGATAATGATTCGGGATCCAGTCAAGTGTTTTGGCTGCTGAAGGAAAGTGAATTGACACCTAGCAGCGCTAACATCCTTGACGGCCGTTACACAG
ctctgac putative branch site (score: 8)
ttatttttt putative PPT
ttggattatttttt TA-rich tract