1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
...tggagtaggagaagtcaactgtaccagttgtgtgcttggggaatgtctcacgccgatgcccattctgatgtgtgtgtgtataccataatatgattgacagGGATTTGCTCGTCTTAGTGCCGTGTACGGAGGCACCTACATGCTTGCCAAACCTGAGTGCAAG
species | Physcomitrella patens |
transcript | PP1S20_16V6.1 |
intron # | 7 |
splice site | 3' |
intron type | U2 |
EST: GAGGATCACCTTACATCTATCCACTCTACGGCCTCGGCGAGTTGCCACAG GGATTTGCTCGTCTTAGTGCCGTGTACGGAGGCACCTACATGCTTGCCAAAEST: gi|162187203|gb|FC363153.1|FC363153
genomic: GAGGATCACCTTACATCTATCCACTCTACGGCCTCGGCGAGTTGCCACAGgttcgcgttt ... tgattgacagGGATTTGCTCGTCTTAGTGCCGTGTACGGAGGCACCTACATGCTTGCCAAA
EST: GAGGATCACCTTACATCTATCCACTCTACGGCCTCGGCGAGTTGCCACAG GGATTTGCTCGTCTTAGTGCCGTGTACEST: gi|162229881|gb|FC404334.1|FC404334
genomic: GAGGATCACCTTACATCTATCCACTCTACGGCCTCGGCGAGTTGCCACAGgttcgcgttt ... tgattgacagGGATTTGCTCGTCTTAGTGCCGTGTAC
EST: GAGGATCACCTTACATCTATCCACTCTACGGCCTCGGCGAGTTGCCACAG GGATTTGCTCGTCTTAGTGCCGTGTACEST: gi|162257732|gb|FC433659.1|FC433659
genomic: GAGGATCACCTTACATCTATCCACTCTACGGCCTCGGCGAGTTGCCACAGgttcgcgttt ... tgattgacagGGATTTGCTCGTCTTAGTGCCGTGTAC
EST: GAGGATCACCTTACATCTATCCACTCTACGGCCTCGGCGAGTTGCCACAG GGATTTGCTCGTCTTAGTGCCGTGTACGGAGG
genomic: GAGGATCACCTTACATCTATCCACTCTACGGCCTCGGCGAGTTGCCACAGgttcgcgttt ... tgattgacagGGATTTGCTCGTCTTAGTGCCGTGTACGGAGG
tctcacgccgatgcccattctgatgtgtgtgtgtataccataatatgattgacagGGATTTGCTCGTCTTAGTGCCGTGTACGGAGGCACCTACATGCTTGCCAAACCTGAGTGCAAG
ttctgat putative branch site (score: 10)
ataatatgatt TA-rich tract