1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
...tgttaatccttaagccatatcttcgttcttttggagttgtcttttttcctaatcacattgaagtacagttttgagattaaattaaataatatgactacagGTTATACAATACAGAACACAGCAATCTCGGCTCTTTCCACTGCTGGCAACTGCGTATGCTTACCGCGCCGTCGGTTTCTGGATGAAATCATTATACGCTG
species | Physcomitrella patens |
transcript | PP1S209_135V6.1 |
intron # | 7 |
splice site | 3' |
intron type | U2 |
EST: GTGCTGTACGTCGTCAGTTTGGCAATAAAGACGAGCCTGGTGAACTCCAG GTTATACAATACAGAACACAGCAATCTCGGCTCTATCCACTGCTGGCAACTEST: gi|162268243|gb|FC444532.1|FC444532
genomic: GTGCTGTACGTCGTCAGTTTGGCAATAAAGACGAGCCTGGTGAACTCCAGgttagttttt ... atgactacagGTTATACAATACAGAACACAGCAATCTCGGCTCTTTCCACTGCTGGCAACT
EST: GTGCTGTACGTCGTCAGTTTGGCAATAAAGACGAGCCTGGTGAACTCCAG GTTATACAATACAGAACACAGCAATCTCGGCTCTTTCCACTGCTGGCAACTEST: gi|67571085|gb|BJ943909.1|BJ943909
genomic: GTGCTGTACGTCGTCAGTTTGGCAATAAAGACGAGCCTGGTGAACTCCAGgttagttttt ... atgactacagGTTATACAATACAGAACACAGCAATCTCGGCTCTTTCCACTGCTGGCAACT
EST: GTGCTGTACGTCGTCAGTTTGGCAATAAAGACGAGCCTGGTGAACTCCAG GTTATACAATACAGAACACAGCAAEST: gi|162198834|gb|FC374317.1|FC374317
genomic: GTGCTGTACGTCGTCAGTTTGGCAATAAAGACGAGCCTGGTGAACTCCAGgttagttttt ... atgactacagGTTATACAATACAGAACACAGCAA
EST: GTGCTGTACGTCGTCAGTTTGGCAATAAAGACGAGCCTGGTGAACTCCAG GTTATACAATACAGAACACAGCAATCTCGGCTCTTTCCACTGCTGGCAACTEST: gi|162244831|gb|FC420183.1|FC420183
genomic: GTGCTGTACGTCGTCAGTTTGGCAATAAAGACGAGCCTGGTGAACTCCAGgttagttttt ... atgactacagGTTATACAATACAGAACACAGCAATCTCGGCTCTTTCCACTGCTGGCAACT
EST: GTGCTGTACGTCGTCAGTTTGGCAATAAAGACGAGCCTGGTGAACTCCAG GTTATACAATACAGAACACAGCAATCTCGGCTCTTTCCACTGCTGGCAACT
genomic: GTGCTGTACGTCGTCAGTTTGGCAATAAAGACGAGCCTGGTGAACTCCAGgttagttttt ... atgactacagGTTATACAATACAGAACACAGCAATCTCGGCTCTTTCCACTGCTGGCAACT
ttcctaatcacattgaagtacagttttgagattaaattaaataatatgactacagGTTATACAATACAGAACACAGCAATCTCGGCTCTTTCCACTGCTGGCAACTGCGTATGCTTACCGCGCCGTCGGTTTCTGGATGAAATCATTATACGCTG
tcctaat putative branch site (score: 6)
tacagttttgagatta TA-rich tract