1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
gttagtctcttcctctcaaactatgtaactcattcatttcctttctggccttctttcttccaatagactttgcatctatatcttggccacaaacactacttaagatttggttggctgtgttgattattttcgttgactttactatttcactcaatgtgatgctcgtagGACCCCGAGTGCGGAGGAATATCTGACAGGCCTGACGACGCTGTAGACGTCTTCCACACTTTCTTTGGTGTTGCAG
species | Physcomitrella patens |
transcript | PP1S163_87V6.1 |
intron # | 7 |
splice site | 3' |
intron type | U2 |
EST: TGCACTGGATTGATAGGAAGAAATTGGAGCAATTTATTCTTGATTGCCAG GACCCCGAGTGCGGAGGAATATCTGACAGGCCTGACGACGCTGTAGACGTCEST: gi|18338079|gb|BJ170103.1|BJ170103
genomic: TGCACTGGATTGATAGGAAGAAATTGGAGCAATTTATTCTTGATTGCCAGgttagtctct ... atgctcgtagGACCCCGAGTGCGGAGGAATATCTGACAGGCCTGACGACGCTGTAGACGTC
EST: TGCACTGGATTGATAGGAAGAAATTGGAGCAATTTATTCTTGATTGCCAG GACCCCGAGTGCGGAGGAATATCTGACAGGCCTGACGACGCTGTAGACGTCEST: gi|37829001|gb|BJ587013.1|BJ587013
genomic: TGCACTGGATTGATAGGAAGAAATTGGAGCAATTTATTCTTGATTGCCAGgttagtctct ... atgctcgtagGACCCCGAGTGCGGAGGAATATCTGACAGGCCTGACGACGCTGTAGACGTC
EST: TGCACTGGATTGATAGGAAGAAATTGGAGCAATTTATTCTTGATTGCCAG GACCCCGAGTGCGGAGGAATATCTGACAGGCCTGACGACGCTGTAGACGTCEST: gi|208362844|gb|DC950794.1|DC950794
genomic: TGCACTGGATTGATAGGAAGAAATTGGAGCAATTTATTCTTGATTGCCAGgttagtctct ... atgctcgtagGACCCCGAGTGCGGAGGAATATCTGACAGGCCTGACGACGCTGTAGACGTC
EST: TGCACTGGATTGATAGGAAGAAATTGGAGCAATTTATTCTTGATTGCCAG GACCCCGAGTGCGGAGGAATATCTGACAGGCCTGACGACGCTGTAGACGTCEST: gi|208388699|gb|DC953461.1|DC953461
genomic: TGCACTGGATTGATAGGAAGAAATTGGAGCAATTTATTCTTGATTGCCAGgttagtctct ... atgctcgtagGACCCCGAGTGCGGAGGAATATCTGACAGGCCTGACGACGCTGTAGACGTC
EST: TGCACTGGATTGATAGGAAGAAATTGGAGCAATTTATTCTTGATTGCCAG GACCCCGAGTGCGGAGGAATATCTGACAGGCCTGACGACGCTGTAGACGTC
genomic: TGCACTGGATTGATAGGAAGAAATTGGAGCAATTTATTCTTGATTGCCAGgttagtctct ... atgctcgtagGACCCCGAGTGCGGAGGAATATCTGACAGGCCTGACGACGCTGTAGACGTC
gctgtgttgattattttcgttgactttactatttcactcaatgtgatgctcgtagGACCCCGAGTGCGGAGGAATATCTGACAGGCCTGACGACGCTGTAGACGTCTTCCACACTTTCTTTGGTGTTGCAG
cgttgac putative branch site (score: 6)
ttgattatttt TA-rich tract