1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' |
...aagatggcgctagactgaaaaactcttatttctgatattaggttatttatttatttatttatttatacatatgtttaatctgaattttcttctttcacagGGTGTTCTTCTGACTGGTCCACCTGGCACTGGAAAGACTCTGCTGGCCAAG
species | Physcomitrella patens |
transcript | PP1S9_238V6.1 |
intron # | 6 |
splice site | 3' |
intron type | U2 |
EST: ATCTGAAAAACCCTGCCAAATTTACTCGTCTTGGTGGCAAGTTGCCTAAG GGTGTTCTTCTGACTGGTCCACCTGGCACTGGAAAGACTCTGCTGGCCAAGEST: gi|162202061|gb|FC377267.1|FC377267
genomic: ATCTGAAAAACCCTGCCAAATTTACTCGTCTTGGTGGCAAGTTGCCTAAGgtgaatcgaa ... tctttcacagGGTGTTCTTCTGACTGGTCCACCTGGCACTGGAAAGACTCTGCTGGCCAAG
EST: ATCTGAAAAACCCTGCCAAATTTACTCGTCTTGGTGGCAAGTTGCCTAAG GGTGTTCTTCTGACTGGTCCACCTGGCACTGGAAAGACTCTGCTGGCCAAGEST: gi|67570009|gb|BJ942833.1|BJ942833
genomic: ATCTGAAAAACCCTGCCAAATTTACTCGTCTTGGTGGCAAGTTGCCTAAGgtgaatcgaa ... tctttcacagGGTGTTCTTCTGACTGGTCCACCTGGCACTGGAAAGACTCTGCTGGCCAAG
EST: ATCTGAAAAACCCTGCCAAATTTACTCGTCTTGGTGGCAAGTTGCCTAAG GGTGTTCTTCTGACTGGTCCACCTGGCACTGGAAAGACTCTGCTGG
genomic: ATCTGAAAAACCCTGCCAAATTTACTCGTCTTGGTGGCAAGTTGCCTAAGgtgaatcgaa ... tctttcacagGGTGTTCTTCTGACTGGTCCACCTGGCACTGGAAAGACTCTGCTGG
tttatttatttatttatttatacatatgtttaatctgaattttcttctttcacagGGTGTTCTTCTGACTGGTCCACCTGGCACTGGAAAGACTCTGCTGGCCAAG
gtttaat putative branch site (score: 8)
ttttcttctttcac putative PPT
ttatttatttatttat TA-rich tract