1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
gtattgtcaaatcaattcttgataagcactttcattgagattcatttcctttctcaggatcgttgtgtacatctcgacgatactaatgtataggttacacttttgtagCATGAGGCTGAGGCGAAATTTAAGCGTGTGGGCGATGCTTACCGTACTTTGCGAGGACTTCTTTAGGCAACCCAGAAAGTCGAATCAAAGTTAGCAATTG
species | Physcomitrella patens |
transcript | PP1S90_51V6.1 |
intron # | 6 |
splice site | 3' |
intron type | U2 |
EST: GTCAGTGTGCTCTCTCATGGCATCCAGATCGACACGATGGTCATCTGAAG CATGAGGCTGAGGCGAAATTTAAGCGTGTGGGCGATGCTTACCGTACTTTG
genomic: GTCAGTGTGCTCTCTCATGGCATCCAGATCGACACGATGGTCATCTGAAGgtattgtcaa ... acttttgtagCATGAGGCTGAGGCGAAATTTAAGCGTGTGGGCGATGCTTACCGTACTTTG
tcaggatcgttgtgtacatctcgacgatactaatgtataggttacacttttgtagCATGAGGCTGAGGCGAAATTTAAGCGTGTGGGCGATGCTTACCGTACTTTGCGAGGACTTCTTTAGGCAACCCAGAAAGTCGAATCAAAGTTAGCAATTG
tactaat putative branch site (score: 1)
cactttt putative PPT
taatgtata TA-rich tract