1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
gtaatcgaatgtcgaaccacagaactataactagatctttttggagacatggagtgaaccttttggcgctgatgtctcaacgtgactgtggtattaacttcttcaatatcacaatgtttttgcagAAATTTTGAAACCAGAGGTTGTGGATTGTATGAACAAGTACGCCAGTGCTGGTGATGTGAACAAAAAATTTAGCAACTTAGCGCACTCCTTTCTTGCTAC
species | Physcomitrella patens |
transcript | PP1S78_168V6.1 |
intron # | 6 |
splice site | 3' |
intron type | U2 |
EST: ATCGGCTATTGCAACGTTATATTACCTCTGTAACCCTGCAACCAGAAAAG AAATTTTGAAACCAGAGGTTGTGGATTGTATGAACAAGTACGCCAGTGCTG
genomic: ATCGGCTATTGCAACGTTATATTACCTCTGTAACCCTGCAACCAGAAAAGgtaatcgaat ... gtttttgcagAAATTTTGAAACCAGAGGTTGTGGATTGTATGAACAAGTACGCCAGTGCTG
gatgtctcaacgtgactgtggtattaacttcttcaatatcacaatgtttttgcagAAATTTTGAAACCAGAGGTTGTGGATTGTATGAACAAGTACGCCAGTGCTGGTGATGTGAACAAAAAATTTAGCAACTTAGCGCACTCCTTTCTTGCTAC
tattaac putative branch site (score: 1)
tgttttt putative PPT
tattaactt TA-rich tract