1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' |
...atctttgcaaatgatttagctggtggtaattgttagtacctcatacaacacttccaagtatttgacagttattcggctgtgctttgctattgtctgatagTTTGAAACTATGGCATTTGCATCCTCTGTGATGAGTGGCAAATTATCGTTCTGGTTTTGGGTAATTGCTACTATCCCTTTCTACGGTGCCACTTGGGAAA
species | Physcomitrella patens |
transcript | PP1S68_234V6.1 |
intron # | 6 |
splice site | 3' |
intron type | U2 |
EST: CGGTTGTGATGCCCTCACTTGCTCG TTTGAAACTATGGCATTTGCATCCTCTGTGATGAGTGGCAAATTATCGTTCEST: gi|100391368|gb|BY971622.1|BY971622
genomic: CGGTTGTGATGCCCTCACTTGCTCGgttagtgata ... tgtctgatagTTTGAAACTATGGCATTTGCATCCTCTGTGATGAGTGGCAAATTATCGTTC
EST: CGGTTGTGATGCCCTCACTTGCTCG TTTGAAACTATGGCATTTGCATCCTCTGTGATGAGTGGCAAATTATCGTTCEST: gi|208353776|gb|DC906464.1|DC906464
genomic: CGGTTGTGATGCCCTCACTTGCTCGgttagtgata ... tgtctgatagTTTGAAACTATGGCATTTGCATCCTCTGTGATGAGTGGCAAATTATCGTTC
EST: CGGTTGTGATGCCCTCACTTGCTCG TTTGAAACTATGGCATTTGCATCCTCTGTGATGAGTGGCAAATTATCGTTCEST: gi|100441829|gb|BY981052.1|BY981052
genomic: CGGTTGTGATGCCCTCACTTGCTCGgttagtgata ... tgtctgatagTTTGAAACTATGGCATTTGCATCCTCTGTGATGAGTGGCAAATTATCGTTC
EST: CGGTTGTGATGCCCTCACTTGCTCG TTTGAAACTATGGCATTTGCATCCTCTGTGATGAGTGGCAAATTATCGTTCEST: gi|208400731|gb|DC904909.1|DC904909
genomic: CGGTTGTGATGCCCTCACTTGCTCGgttagtgata ... tgtctgatagTTTGAAACTATGGCATTTGCATCCTCTGTGATGAGTGGCAAATTATCGTTC
EST: CGGTTGTGATGCCCTCACTTGCTCG TTTGAAACTATGGCATTTGCATCCTCTGTGATGAGTGGCAAATTATCGTTCEST: gi|208365198|gb|DC931164.1|DC931164
genomic: CGGTTGTGATGCCCTCACTTGCTCGgttagtgata ... tgtctgatagTTTGAAACTATGGCATTTGCATCCTCTGTGATGAGTGGCAAATTATCGTTC
EST: CGGTTGTGATGCCCTCACTTGCTCG TTTGGAACTATGGCATTTGCATCCTCTGTGATGAGTGGCAAATTATCGTTCEST: gi|100451564|gb|CJ974830.1|CJ974830
genomic: CGGTTGTGATGCCCTCACTTGCTCGgttagtgata ... tgtctgatagTTTGAAACTATGGCATTTGCATCCTCTGTGATGAGTGGCAAATTATCGTTC
EST: CGGTTGTGATGCCCTCACTTGCTCG TTTGAAACTATGGCATTTGCATCCTCTGTGATGAGTGGCAAATTATCGTTC
genomic: CGGTTGTGATGCCCTCACTTGCTCGgttagtgata ... tgtctgatagTTTGAAACTATGGCATTTGCATCCTCTGTGATGAGTGGCAAATTATCGTTC
caacacttccaagtatttgacagttattcggctgtgctttgctattgtctgatagTTTGAAACTATGGCATTTGCATCCTCTGTGATGAGTGGCAAATTATCGTTCTGGTTTTGGGTAATTGCTACTATCCCTTTCTACGGTGCCACTTGGGAAA
atttgac putative branch site (score: 2)
aagtattt TA-rich tract