1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
...tggaatgggttaaaatgtgagcaagcaattaaacatcatgaggtggacatgaccatgtcggaacaagtgcattattttttcccttaatttacagtatcagACCTTTCTTATTTCTATGAACGAAGTAGGGACGGCTTTTTGCAACCTACTGGTTATTACCCAACTGTTTTTTTCAACGAGTTTTGGTTGCTGAGAGACAA
species | Physcomitrella patens |
transcript | PP1S64_201V6.1 |
intron # | 6 |
splice site | 3' |
intron type | U12 (go to U12 genes for details) |
EST: ATATCCGAAAGTTGGCGCCCCACCACCAATTGCTGAAC ACCTTTCTTATTTCTATGAACGAAGTAGGGACGGCTTTTTGCAACCTACTGEST: gi|162210481|gb|FC386777.1|FC386777
genomic: ATATCCGAAAGTTGGCGCCCCACCACCAATTGCTGAACgtatccattc ... acagtatcagACCTTTCTTATTTCTATGAACGAAGTAGGGACGGCTTTTTGCAACCTACTG
EST: ATATCCGAAAGTTGGCGCCCCACCACCAATTGCTGAAC ACCTTTCTTATTTCTATGAACGAAGTAGGGACGGCTTTTTGCAACCTACTG
genomic: ATATCCGAAAGTTGGCGCCCCACCACCAATTGCTGAACgtatccattc ... acagtatcagACCTTTCTTATTTCTATGAACGAAGTAGGGACGGCTTTTTGCAACCTACTG
gacatgaccatgtcggaacaagtgcattattttttcccttaatttacagtatcagACCTTTCTTATTTCTATGAACGAAGTAGGGACGGCTTTTTGCAACCTACTGGTTATTACCCAACTGTTTTTTTCAACGAGTTTTGGTTGCTGAGAGACAA
tcccttaat putative branch site
attattttttccctta TA-rich tract