1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
...atcagttgtgttacgatgcttaggttccagaatgaatcaagcaatatcttatatggcagtgtatctaatgtcaccaaagctgtttgcacgtgctgatcagGCGCAGATGACGAATCAGAGGCAGGTTCAGAAGAAGTTGGAGCTGAGATTGATTCTAGACCGGTATCTACTGTTGGGTTTGGTAGGGTATGTATTGAGAA
species | Physcomitrella patens |
transcript | PP1S48_45V6.1 |
intron # | 6 |
splice site | 3' |
intron type | U2 |
EST: GGGCGCAAACTTGGCGTATAGCAAGTTTACGGGGATGACCGATGATGCAG GCGCAGATGACGAATCAGAGGCAGGTTCAGAAGAAGTTGGAGCTGAGATTGEST: gi|208360338|gb|DC949993.1|DC949993
genomic: GGGCGCAAACTTGGCGTATAGCAAGTTTACGGGGATGACCGATGATGCAGgtctgttgtc ... tgctgatcagGCGCAGATGACGAATCAGAGGCAGGTTCAGAAGAAGTTGGAGCTGAGATTG
EST: GGGCGCAAACTTGGCGTATAGCAAGTTTACGGGGATGACCGATGATGCAG GCGCAGATGACGAATCAGAGGCAGGTTCAGAAGAAGTTGGAGCTGAGATTG
genomic: GGGCGCAAACTTGGCGTATAGCAAGTTTACGGGGATGACCGATGATGCAGgtctgttgtc ... tgctgatcagGCGCAGATGACGAATCAGAGGCAGGTTCAGAAGAAGTTGGAGCTGAGATTG
atcttatatggcagtgtatctaatgtcaccaaagctgtttgcacgtgctgatcagGCGCAGATGACGAATCAGAGGCAGGTTCAGAAGAAGTTGGAGCTGAGATTGATTCTAGACCGGTATCTACTGTTGGGTTTGGTAGGGTATGTATTGAGAA
atctaat putative branch site (score: 4)
tatctaat TA-rich tract