1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
gttagctcatcgtttctgccctcttagcacaataattaacttgaatttcagagttattagtggatgtatgctgaagatatctttgcttctgatttttttgtttcctgtgcagGAAGAGCCCATAACCAGTGATGTTGAGTTTTTGGTGATCGCAAGTGACGGTCTATGGGATGTTGTATCAAACCAG
species | Physcomitrella patens |
transcript | PP1S225_37V6.1 |
intron # | 6 |
splice site | 3' |
intron type | U2 |
EST: TTGGTGATCGGCTGCTGAAAAAATATGTTGTTGCCGAACCAGAAATTCAG GAAGAGCCCATAACCAGTGATGTTGAGTTTTTGGTGATCGCAAGTGACGGTEST: gi|162279026|gb|FC454765.1|FC454765
genomic: TTGGTGATCGGCTGCTGAAAAAATATGTTGTTGCCGAACCAGAAATTCAGgttagctcat ... tcctgtgcagGAAGAGCCCATAACCAGTGATGTTGAGTTTTTGGTGATCGCAAGTGACGGT
EST: TTGGTGATCGGCTGCTGAAAAAATATGTTGTTGCCGAACCAGAAATTCAG GAAGAGCCCATAACCAGTGATGTTGAGTTTTTGGTGATCGCAAGTGACGGTEST: gi|162249046|gb|FC421493.1|FC421493
genomic: TTGGTGATCGGCTGCTGAAAAAATATGTTGTTGCCGAACCAGAAATTCAGgttagctcat ... tcctgtgcagGAAGAGCCCATAACCAGTGATGTTGAGTTTTTGGTGATCGCAAGTGACGGT
EST: TTGGTGATCGGCTGCTGAAAAAATATGTTGTTGCCGAACCAGAAATTCAG GAAGAGCCCATAACCAGTGATGTTGAGTTTTTGGTGATCGCAAGTGACGGTEST: gi|208351977|gb|DC925786.1|DC925786
genomic: TTGGTGATCGGCTGCTGAAAAAATATGTTGTTGCCGAACCAGAAATTCAGgttagctcat ... tcctgtgcagGAAGAGCCCATAACCAGTGATGTTGAGTTTTTGGTGATCGCAAGTGACGGT
EST: TTGGTGATCGGCTGCTGAAAAAATATGTTGTTGCCGAACCAGAAATTCAG GAAGAGCCCATAACCAGTGATGTTGAGTTTTTGGTGATCGCAAGTGACGGT
genomic: TTGGTGATCGGCTGCTGAAAAAATATGTTGTTGCCGAACCAGAAATTCAGgttagctcat ... tcctgtgcagGAAGAGCCCATAACCAGTGATGTTGAGTTTTTGGTGATCGCAAGTGACGGT
tagtggatgtatgctgaagatatctttgcttctgatttttttgtttcctgtgcagGAAGAGCCCATAACCAGTGATGTTGAGTTTTTGGTGATCGCAAGTGACGGTCTATGGGATGTTGTATCAAACCAG
ttctgat putative branch site (score: 25)
tctttgcttctgattt CT-rich tract
tgatttttttgttt TA-rich tract